RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 UBLCP1Q8WVY7 318 aaPredicted RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 TANKQ92844 425 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 TM4SF18Q96CE8 201 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 CTHRC1Q96CG8 243 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 SNRNP40Q96DI7 357 aaKnown RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 PGM2Q96G03 612 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 FAR2Q96K12 515 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 FCRL1Q96LA6 429 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ZNF681Q96N22 645 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 SLX1AQ9BQ83 275 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 TRMOQ9BU70 441 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 GATA5Q9BWX5 397 aaPredicted RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 ACPTQ9BZG2 426 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ADAP2Q9NPF8 381 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 PRTFDC1Q9NRG1 225 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 LYARQ9NX58 379 aaKnown RBP5.32□□□□□ -1.56
CUX1-208ENST00000485792 TAS2R7Q9NYW3 318 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ZNF639Q9UID6 485 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 HAO1Q9UJM8 370 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 DTX4Q9Y2E6 619 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 STK38LQ9Y2H1 464 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 ACTL7BQ9Y614 415 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 UNC79Q9P2D8 2635 aa5.32□□□□□ -1.56
CUX1-208ENST00000485792 CCDC151A5D8V7 595 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 PINLYPA6NC86 204 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 EIF4E1BA6NMX2 242 aaKnown RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 PGRMC2O15173 223 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 CTIFO43310 598 aaKnown RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 SLC28A2O43868 658 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 B4GALT2O60909 372 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 SUPT7LO94864 414 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 NADKO95544 446 aaPredicted RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 GPR75O95800 540 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 CHRNGP07510 517 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 FAM58BPP0C7Q3 252 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 SLC35E2P0CK97 266 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 CPA3P15088 417 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 CD96P40200 585 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 STT3AP46977 705 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 NAGLUP54802 743 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 OR4D2P58180 307 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 FUT7Q11130 342 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 MRPL49Q13405 166 aaKnown RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 SERTAD2Q14140 314 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 RCN2Q14257 317 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 ZNF169Q14929 603 aaPredicted RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 INAQ16352 499 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 MEP1AQ16819 746 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 MPEG1Q2M385 716 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 LIPMQ5VYY2 423 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 Q6ZSR9 355 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 GPRIN3Q6ZVF9 776 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 COMMD6Q7Z4G1 85 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 FGD2Q7Z6J4 655 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 CLNKQ7Z7G1 428 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 EXOC3L1Q86VI1 746 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 CRLF3Q8IUI8 442 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 ST13P4Q8IZP2 240 aaPredicted RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 ZADH2Q8N4Q0 377 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 SIRT6Q8N6T7 355 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 ZNF441Q8N8Z8 693 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 OR1N1Q8NGS0 311 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 FAM76AQ8TAV0 307 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 TM9SF4Q92544 642 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 ZNF764Q96H86 408 aaPredicted RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 APOPT1Q96IL0 206 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 SCYL1Q96KG9 808 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 CNDP1Q96KN2 507 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 ZNF354BQ96LW1 612 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 SIGLEC12Q96PQ1 595 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 MRPL1Q9BYD6 325 aaKnown RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 ALOXE3Q9BYJ1 711 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 RPF2Q9H7B2 306 aaKnown RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 ANKRA2Q9H9E1 313 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 LIN28AQ9H9Z2 209 aaKnown RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 SH2D2AQ9NP31 389 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 SLAMF7Q9NQ25 335 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 PLA2G3Q9NZ20 509 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 STMN3Q9NZ72 180 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 SENP1Q9P0U3 644 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 HEY2Q9UBP5 337 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 VPS29Q9UBQ0 182 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 PHF11Q9UIL8 331 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 MCM8Q9UJA3 840 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 G3BP2Q9UN86 482 aaKnown RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 SNX6Q9UNH7 406 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 MRPS33Q9Y291 106 aaKnown RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 WBP11Q9Y2W2 641 aaKnown RBP5.31□□□□□ -1.56
CUX1-208ENST00000485792 ANGPTL3Q9Y5C1 460 aa5.31□□□□□ -1.56
CUX1-208ENST00000485792 AKAP9Q99996 3911 aa5.3□□□□□ -1.56
CUX1-208ENST00000485792 TRAV17A0A0B4J275 112 aa5.3□□□□□ -1.56
CUX1-208ENST00000485792 C1orf226A1L170 272 aa5.3□□□□□ -1.56
CUX1-208ENST00000485792 OR5H15A6NDH6 313 aa5.3□□□□□ -1.56
CUX1-208ENST00000485792 PSMD12O00232 456 aaPredicted RBP5.3□□□□□ -1.56
CUX1-208ENST00000485792 COPEO14579 308 aa5.3□□□□□ -1.56
CUX1-208ENST00000485792 NPHS1O60500 1241 aa5.3□□□□□ -1.56
CUX1-208ENST00000485792 EIF4EBP3O60516 100 aaPredicted RBP5.3□□□□□ -1.56
CUX1-208ENST00000485792 TBX19O60806 448 aa5.3□□□□□ -1.56
CUX1-208ENST00000485792 TRIM13O60858 407 aa5.3□□□□□ -1.56
CUX1-208ENST00000485792 ADAM11O75078 769 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms