RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 RAE1P78406 368 aaKnown RBP11.59□□□□□ -0.55
PTCD1-205ENST00000485746 MPEG1Q2M385 716 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 ARL13AQ5H913 290 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-205ENST00000485746 ZNF324BQ6AW86 544 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-205ENST00000485746 FAM180BQ6P0A1 224 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 LRIG3Q6UXM1 1119 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 RTL4Q6ZR62 310 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 ZCCHC23Q6ZST2 131 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 TRIM46Q7Z4K8 759 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 SAMD14Q8IZD0 417 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-205ENST00000485746 CLYBLQ8N0X4 340 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 LRRC25Q8N386 305 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-205ENST00000485746 VWA5B2Q8N398 1253 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 CPSF7Q8N684 471 aaKnown RBP11.59□□□□□ -0.55
PTCD1-205ENST00000485746 SLC15A4Q8N697 577 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 POGLUT1Q8NBL1 392 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 PSD4Q8NDX1 1056 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 FAM13CQ8NE31 585 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 ADCY4Q8NFM4 1077 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 OR7G1Q8NGA0 311 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 AGR3Q8TD06 166 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 PAIP2Q9BPZ3 127 aaKnown RBP11.59□□□□□ -0.55
PTCD1-205ENST00000485746 SLX1AQ9BQ83 275 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 STMN4Q9H169 189 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-205ENST00000485746 TSPAN10Q9H1Z9 355 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-205ENST00000485746 OR10A5Q9H207 317 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 TNFRSF12AQ9NP84 129 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 HEY2Q9UBP5 337 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 CES1P1Q9UKY3 287 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 CFL2Q9Y281 166 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 SLC5A6Q9Y289 635 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 TRAF6Q9Y4K3 522 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 POLR3HQ9Y535 204 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-205ENST00000485746 DOCK10Q96BY6 2186 aa11.59□□□□□ -0.55
PTCD1-205ENST00000485746 G3V3Y1 287 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 SEMA7AO75326 666 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 CHRNGP07510 517 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 CT62P0C5K7 136 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 RFC3P40938 356 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 NR0B1P51843 470 aaKnown RBP11.58□□□□□ -0.56
PTCD1-205ENST00000485746 NRG3P56975 720 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 SLC37A1P57057 533 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 ZNF763Q0D2J5 394 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 KRTCAP3Q53RY4 240 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 SH2D4BQ5SQS7 431 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 NOXRED1Q6NXP6 359 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 FAM111BQ6SJ93 734 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 FAM47EQ6ZV65 393 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 MDGA2Q7Z553 956 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 EXOC3L1Q86VI1 746 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 ZNF227Q86WZ6 799 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 CCDC116Q8IYX3 515 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 OR5M3Q8NGP4 307 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 FAM76AQ8TAV0 307 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 SSC4DQ8WTU2 575 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 MAGED4Q96JG8 741 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 SGCZQ96LD1 299 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 FRMD6Q96NE9 622 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 WWTR1Q9GZV5 400 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 LRTM1Q9HBL6 345 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 MIEF1Q9NQG6 463 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 SACM1LQ9NTJ5 587 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 C1orf109Q9NX04 203 aa11.58□□□□□ -0.56
PTCD1-205ENST00000485746 FASNP49327 2511 aaKnown RBP11.57□□□□□ -0.56
PTCD1-205ENST00000485746 TRGV8A0A0C4DH27 118 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 A0A1B0GUH1 482 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 ASPDHA6ND91 283 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 ACOT7O00154 380 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 LRRTM2O43300 516 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 ASNA1O43681 348 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 TYROBPO43914 113 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 CDC40O60508 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTCD1-205ENST00000485746 ZWINTO95229 277 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 HSPA4LO95757 839 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 CNR1P21554 472 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 NTSP30990 170 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 MPIP34949 423 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 PTGER1P34995 402 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 SERPINB5P36952 375 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 TDGF1P3P51864 188 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 PER3P56645 1201 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 FUT7Q11130 342 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 MAP4K2Q12851 820 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 EXOSC7Q15024 291 aaKnown RBP11.57□□□□□ -0.56
PTCD1-205ENST00000485746 EBPQ15125 230 aaKnown RBP11.57□□□□□ -0.56
PTCD1-205ENST00000485746 GALNTL6Q49A17 601 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 SLC22A10Q63ZE4 541 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 KANK2Q63ZY3 851 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 GALNT18Q6P9A2 607 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 ANKRD42Q8N9B4 389 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 TWIST2Q8WVJ9 160 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 PKNOX2Q96KN3 472 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 GPR137Q96N19 417 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 FAM173AQ9BQD7 235 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 SSU72Q9NP77 194 aaKnown RBP11.57□□□□□ -0.56
PTCD1-205ENST00000485746 SLC35C2Q9NQQ7 365 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 SIRT5Q9NXA8 310 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 PRODH2Q9UF12 536 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 SH3BGRL2Q9UJC5 107 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 WBP11Q9Y2W2 641 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms