RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 EIF3LQ9Y262 564 aaKnown RBP11.05□□□□□ -0.64
APTX-227ENST00000485479 CPAMD8Q8IZJ3 1885 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 NUP214P35658 2090 aaPredicted RBP11.05□□□□□ -0.64
APTX-227ENST00000485479 BLACEA4D250 179 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 WWP2O00308 870 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 SCAMP2O15127 329 aaKnown RBP11.05□□□□□ -0.64
APTX-227ENST00000485479 ZNF354AO60765 605 aaPredicted RBP11.05□□□□□ -0.64
APTX-227ENST00000485479 CEACAM4O75871 244 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 CYC1P08574 325 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 UFM1P61960 85 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 DUSP8Q13202 625 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 EXT1Q16394 746 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 PRICKLE4Q2TBC4 344 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 PGS1Q32NB8 556 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 ZNF468Q5VIY5 522 aaPredicted RBP11.05□□□□□ -0.64
APTX-227ENST00000485479 AGAP7PQ5VUJ5 663 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 TMEM107Q6UX40 140 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 RGS9BPQ6ZS82 235 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 BEST3Q8N1M1 668 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 OR14A16Q8NHC5 309 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 C9orf43Q8TAL5 461 aaPredicted RBP11.05□□□□□ -0.64
APTX-227ENST00000485479 DAZLQ92904 295 aaKnown RBP11.05□□□□□ -0.64
APTX-227ENST00000485479 VPS50Q96JG6 964 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 MAELQ96JY0 434 aaKnown RBP11.05□□□□□ -0.64
APTX-227ENST00000485479 AGAP4Q96P64 663 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 FAM107BQ9H098 131 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 CDCP1Q9H5V8 836 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 MMP25Q9NPA2 562 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 MAT2BQ9NZL9 334 aa11.05□□□□□ -0.64
APTX-227ENST00000485479 TLN1Q9Y490 2541 aaKnown RBP11.04□□□□□ -0.64
APTX-227ENST00000485479 PRRC2CQ9Y520 2896 aaKnown RBP11.04□□□□□ -0.64
APTX-227ENST00000485479 TMEM200CA6NKL6 621 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 CSNK2A2P19784 350 aaPredicted RBP11.04□□□□□ -0.64
APTX-227ENST00000485479 MAPK1P28482 360 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 IL12AP29459 219 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 MC3RP41968 323 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 CLCN2P51788 898 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 SEC24CP53992 1094 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 MGAT2Q10469 447 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 NFATC3Q12968 1075 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 NADK2Q4G0N4 442 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 IRAK1BP1Q5VVH5 260 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 TMEM64Q6YI46 380 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 ASB18Q6ZVZ8 466 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 IKBIPQ70UQ0 350 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 SZRD1Q7Z422 152 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 ANKRD46Q86W74 232 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 VWA5B2Q8N398 1253 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 CATSPER1Q8NEC5 780 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 OR7G2Q8NG99 324 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 OR1N1Q8NGS0 311 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 M1APQ8TC57 530 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 VMP1Q96GC9 406 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 METTL2AQ96IZ6 378 aaKnown RBP11.04□□□□□ -0.64
APTX-227ENST00000485479 DEFB126Q9BYW3 111 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 TCF7L2Q9NQB0 619 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 AIG1Q9NVV5 245 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 PSME2Q9UL46 239 aa11.04□□□□□ -0.64
APTX-227ENST00000485479 SLCO1B7G3V0H7 640 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 PCDH17O14917 1159 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 ANKRD28O15084 1053 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 PDPK1O15530 556 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 IGKV3-11P04433 115 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 ATP1B1P05026 303 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 ABCB1P08183 1280 aaPredicted RBP11.03□□□□□ -0.64
APTX-227ENST00000485479 CDK9P50750 372 aaKnown RBP11.03□□□□□ -0.64
APTX-227ENST00000485479 DGKQP52824 942 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 PDE7AQ13946 482 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 OR4F3Q6IEY1 312 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 HSDL2Q6YN16 418 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 RIMKLAQ8IXN7 391 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 CLECL1Q8IZS7 167 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 CLEC4FQ8N1N0 589 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 OR52R1Q8NGF1 315 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 OTUB1Q96FW1 271 aaPredicted RBP11.03□□□□□ -0.64
APTX-227ENST00000485479 FBXL20Q96IG2 436 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 AMDHD1Q96NU7 426 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 GIMAP4Q9NUV9 329 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 EHD3Q9NZN3 535 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 COPS7AQ9UBW8 275 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 BCAP29Q9UHQ4 241 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 MYO1GB0I1T2 1018 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 OR2J2O76002 312 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 WDPCPO95876 746 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 CBX7O95931 251 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 PRPS2P11908 318 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 ICAM2P13598 275 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 S1PR1P21453 382 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 NTSP30990 170 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 HPCAL1P37235 193 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 ASMTP46597 345 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 SLC37A1P57057 533 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 RNF4P78317 190 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 MAD2L1Q13257 205 aaPredicted RBP11.03□□□□□ -0.64
APTX-227ENST00000485479 TERF2Q15554 542 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 LACTB2Q53H82 288 aaPredicted RBP11.03□□□□□ -0.64
APTX-227ENST00000485479 ZNF628Q5EBL2 1059 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 SPANXN4Q5MJ08 99 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 ACER2Q5QJU3 275 aa11.03□□□□□ -0.64
APTX-227ENST00000485479 OGFOD2Q6N063 350 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms