RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.51■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF395Q9H8N7 513 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-213ENST00000485080 SLC35C2Q9NQQ7 365 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 THAP1Q9NVV9 213 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF639Q9UID6 485 aa16.51■□□□□ 0.23
SREBF1-213ENST00000485080 EXO1Q9UQ84 846 aaKnown RBP16.51■□□□□ 0.23
SREBF1-213ENST00000485080 HRKO00198 91 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 ITGA10O75578 1167 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 ERAL1O75616 437 aaKnown RBP16.5■□□□□ 0.23
SREBF1-213ENST00000485080 NEURL1O76050 574 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 CLPSP04118 112 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 S1PR1P21453 382 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 ALDH9A1P49189 494 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 CYB561P49447 251 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 HK2P52789 917 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 ERVK-8P63133 956 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 C2orf80Q0P641 193 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF267Q14586 743 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-213ENST00000485080 INPP5JQ15735 1006 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-213ENST00000485080 PRICKLE4Q2TBC4 344 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 ATG16L1Q676U5 607 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 LRRC34Q8IZ02 419 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF615Q8N8J6 731 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 SUN3Q8TAQ9 357 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 CPT1CQ8TCG5 803 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 AGR3Q8TD06 166 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 MIB2Q96AX9 1013 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 C19orf60Q96EN9 201 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 SCMH1Q96GD3 660 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 C3orf30Q96M34 536 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 ERVK-19Q9WJR5 959 aa16.5■□□□□ 0.23
SREBF1-213ENST00000485080 SVILO95425 2214 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 MYO1GB0I1T2 1018 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 IFI6P09912 130 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 BCKDHAP12694 445 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 SDC1P18827 310 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 TACR1P25103 407 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 MAPK1P28482 360 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 SOX18P35713 384 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 FEN1P39748 380 aaKnown RBP16.49■□□□□ 0.23
SREBF1-213ENST00000485080 ASMTP46597 345 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 MLLT10P55197 1068 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 RPL38P63173 70 aaKnown RBP16.49■□□□□ 0.23
SREBF1-213ENST00000485080 FOXK1P85037 733 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 OR1C1Q15619 314 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF750Q32MQ0 723 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 ATP6AP1LQ52LC2 224 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 PIGGQ5H8A4 983 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 COLEC12Q5KU26 742 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 C6orf136Q5SQH8 315 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF468Q5VIY5 522 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-213ENST00000485080 RNF111Q6ZNA4 994 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF227Q86WZ6 799 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 C9orf40Q8IXQ3 194 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 SLC15A4Q8N697 577 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 GOLGA6L1Q8N7Z2 621 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 C17orf47Q8NEP4 570 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 MGARPQ8TDB4 240 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 CNPPD1Q9BV87 410 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 GIMAP4Q9NUV9 329 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 MAT2BQ9NZL9 334 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 LRFN1Q9P244 771 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 TENM4Q6N022 2769 aa16.49■□□□□ 0.23
SREBF1-213ENST00000485080 J3QKU1 62 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 SASH3O75995 380 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 SLITRK5O94991 958 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 CT62P0C5K7 136 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 CD46P15529 392 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 NT5EP21589 574 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 MPIP34949 423 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 SSR4P51571 173 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 DUSP2Q05923 314 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 PDE7AQ13946 482 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 EBPQ15125 230 aaKnown RBP16.48■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF766Q5HY98 468 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 C6orf163Q5TEZ5 329 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 SLC29A4Q7RTT9 530 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 TICAM1Q8IUC6 712 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 VWA5B2Q8N398 1253 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 ZNF441Q8N8Z8 693 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 THAP3Q8WTV1 239 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-213ENST00000485080 TP53INP1Q96A56 240 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 SNRNP40Q96DI7 357 aaKnown RBP16.48■□□□□ 0.23
SREBF1-213ENST00000485080 MTERF3Q96E29 417 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 EGLN2Q96KS0 407 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 SIGLEC12Q96PQ1 595 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 RASL10BQ96S79 203 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 MANSC1Q9H8J5 431 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 MIEF1Q9NQG6 463 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 ASIC5Q9NY37 505 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 LUZP4Q9P127 313 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 ENTPD4Q9Y227 616 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 CFL2Q9Y281 166 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 LRRK2Q5S007 2527 aa16.48■□□□□ 0.23
SREBF1-213ENST00000485080 SKAP2O75563 359 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-213ENST00000485080 BCAS2O75934 225 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-213ENST00000485080 OR2J2O76002 312 aa16.47■□□□□ 0.23
SREBF1-213ENST00000485080 F10P00742 488 aa16.47■□□□□ 0.23
SREBF1-213ENST00000485080 JUNP05412 331 aaKnown RBP16.47■□□□□ 0.23
SREBF1-213ENST00000485080 PRPS2P11908 318 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms