RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 B4GALT7Q9UBV7 327 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 WASHC1A8K0Z3 465 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 TP53I11O14683 189 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 ADH7P40394 386 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 PEX19P40855 299 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 CKAP4Q07065 602 aaKnown RBP10.53□□□□□ -0.72
SCFD1-206ENST00000484733 GGTA1PQ4G0N0 100 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 LIX1LQ8IVB5 337 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 ZNF615Q8N8J6 731 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 C17orf47Q8NEP4 570 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 SPPL2AQ8TCT8 520 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 NOL11Q9H8H0 719 aaKnown RBP10.53□□□□□ -0.72
SCFD1-206ENST00000484733 AHSPQ9NZD4 102 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 NINJ2Q9NZG7 142 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 CSMD1Q96PZ7 3565 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 ARHGAP21Q5T5U3 1957 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 DNAJC13O75165 2243 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 C2orf92A0A1B0GVN3 265 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 HSPB2A8KAH6 182 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 AHRRA9YTQ3 701 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 SNX4O95219 450 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 SIX3O95343 332 aaPredicted RBP10.52□□□□□ -0.72
SCFD1-206ENST00000484733 COL6A2P12110 1019 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 PIK3R1P27986 724 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 RPP38P78345 283 aaKnown RBP10.52□□□□□ -0.72
SCFD1-206ENST00000484733 HSPB2Q16082 182 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 PRAMEF20Q5VT98 475 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 TMEM198Q66K66 360 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 SYT10Q6XYQ8 523 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 ULK2Q8IYT8 1036 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 PLD6Q8N2A8 252 aaKnown RBP10.52□□□□□ -0.72
SCFD1-206ENST00000484733 PTGR2Q8N8N7 351 aaPredicted RBP10.52□□□□□ -0.72
SCFD1-206ENST00000484733 FAM13CQ8NE31 585 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 TRPC4APQ8TEL6 797 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 SLC44A1Q8WWI5 657 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 UCN3Q969E3 161 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 ADIPOR1Q96A54 375 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 ZNF597Q96LX8 424 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 GAL3ST4Q96RP7 486 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 ANGPTL4Q9BY76 406 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 PCTPQ9UKL6 214 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 L3MBTL1Q9Y468 752 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 NPFFR2Q9Y5X5 522 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 AKAP9Q99996 3911 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 NCKAP5O14513 1909 aa10.52□□□□□ -0.72
SCFD1-206ENST00000484733 GLOD5A6NK44 160 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 PGRMC2O15173 223 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 CDH16O75309 829 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 CD1EP15812 388 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 SERPINB9P50453 376 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 NEK2P51955 445 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 CCNG1P51959 295 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 DLX5P56178 289 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 TSNAXIP1Q2TAA8 658 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 FRG2Q64ET8 278 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 TMEM81Q6P7N7 255 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 PAGE2Q7Z2X7 111 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 GALNT12Q8IXK2 581 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 METTL4Q8N3J2 472 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 OR4K14Q8NGD5 310 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 DOK4Q8TEW6 326 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 FRG2BQ96QU4 278 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 DOHHQ9BU89 302 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 TSPYL1Q9H0U9 437 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 VPS11Q9H270 941 aa10.52□□□□□ -0.73
SCFD1-206ENST00000484733 SYT5O00445 386 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 EPPINO95925 133 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 HPNP05981 417 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 NAGAP17050 411 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 SSTR4P31391 388 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 CEACAM8P31997 349 aaPredicted RBP10.51□□□□□ -0.73
SCFD1-206ENST00000484733 TMED10P49755 219 aaKnown RBP10.51□□□□□ -0.73
SCFD1-206ENST00000484733 SLC7A5Q01650 507 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 TRAF3Q13114 568 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 RPS6KA2Q15349 733 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 SF3B4Q15427 424 aaKnown RBP eCLIP10.51□□□□□ -0.732e-7■■■□□ 18
SCFD1-206ENST00000484733 UAP1Q16222 522 aaPredicted RBP10.51□□□□□ -0.73
SCFD1-206ENST00000484733 HLA-DQA1Q5Y7H0 255 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 C8orf74Q6P047 294 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 ARSKQ6UWY0 536 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 LIX1Q8N485 282 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 OR52B6Q8NGF0 335 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 ATP6V1E2Q96A05 226 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 MRRFQ96E11 262 aaKnown RBP10.51□□□□□ -0.73
SCFD1-206ENST00000484733 TMEM41AQ96HV5 264 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 LRRC1Q9BTT6 524 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 OR10A5Q9H207 317 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 SLC6A15Q9H2J7 730 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 ZBTB26Q9HCK0 441 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 TEX10Q9NXF1 929 aaPredicted RBP10.51□□□□□ -0.73
SCFD1-206ENST00000484733 CES1P1Q9UKY3 287 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 DCHS2Q6V1P9 2916 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 ESYT3A0FGR9 886 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 SMIM24O75264 130 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 GUCY1B2O75343 617 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 CT62P0C5K7 136 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 CPMP14384 443 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 S1PR1P21453 382 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 CNTFP26441 200 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 TIMP3P35625 211 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms