RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 HK2P52789 917 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 SLC37A1P57057 533 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 RPL38P63173 70 aaKnown RBP14.75□□□□□ -0.05
UPF3A-208ENST00000484246 MGAT2Q10469 447 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 MPEG1Q2M385 716 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 PRICKLE4Q2TBC4 344 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 C9orf40Q8IXQ3 194 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 HORMAD2Q8N7B1 307 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 CATSPER1Q8NEC5 780 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 MIB2Q96AX9 1013 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 SCMH1Q96GD3 660 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 C3orf30Q96M34 536 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 CNPPD1Q9BV87 410 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF395Q9H8N7 513 aaPredicted RBP14.75□□□□□ -0.05
UPF3A-208ENST00000484246 SLC35C2Q9NQQ7 365 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 THAP1Q9NVV9 213 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 ASIC5Q9NY37 505 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 MAT2BQ9NZL9 334 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF639Q9UID6 485 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 CPAMD8Q8IZJ3 1885 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 TTLL8A6PVC2 850 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 ITGA10O75578 1167 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 SASH3O75995 380 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 SLITRK5O94991 958 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 S1PR1P21453 382 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 MAPK1P28482 360 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 SOX18P35713 384 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 ASMTP46597 345 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 FOXK1P85037 733 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 DUSP2Q05923 314 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 PDE7AQ13946 482 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF267Q14586 743 aaPredicted RBP14.74□□□□□ -0.05
UPF3A-208ENST00000484246 EBPQ15125 230 aaKnown RBP14.74□□□□□ -0.05
UPF3A-208ENST00000484246 OR1C1Q15619 314 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF750Q32MQ0 723 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 ATP6AP1LQ52LC2 224 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 C6orf163Q5TEZ5 329 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 ATG16L1Q676U5 607 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 RNF111Q6ZNA4 994 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 VWA5B2Q8N398 1253 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 GOLGA6L1Q8N7Z2 621 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF615Q8N8J6 731 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF441Q8N8Z8 693 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 C17orf47Q8NEP4 570 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 SUN3Q8TAQ9 357 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 CPT1CQ8TCG5 803 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 PAIP2Q9BPZ3 127 aaKnown RBP14.74□□□□□ -0.05
UPF3A-208ENST00000484246 GIMAP4Q9NUV9 329 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 ENTPD4Q9Y227 616 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 DOCK10Q96BY6 2186 aa14.74□□□□□ -0.05
UPF3A-208ENST00000484246 MYO1GB0I1T2 1018 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 J3QKU1 62 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 SKAP2O75563 359 aaPredicted RBP14.73□□□□□ -0.05
UPF3A-208ENST00000484246 ERAL1O75616 437 aaKnown RBP14.73□□□□□ -0.05
UPF3A-208ENST00000484246 JUNP05412 331 aaKnown RBP14.73□□□□□ -0.05
UPF3A-208ENST00000484246 CT62P0C5K7 136 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 BCKDHAP12694 445 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 NT5EP21589 574 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 FEN1P39748 380 aaKnown RBP14.73□□□□□ -0.05
UPF3A-208ENST00000484246 CYB561P49447 251 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 SSR4P51571 173 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 OCRLQ01968 901 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 C2orf80Q0P641 193 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 INPP5JQ15735 1006 aaPredicted RBP14.73□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF628Q5EBL2 1059 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 COLEC12Q5KU26 742 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 C6orf136Q5SQH8 315 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF468Q5VIY5 522 aaPredicted RBP14.73□□□□□ -0.05
UPF3A-208ENST00000484246 SLC29A4Q7RTT9 530 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF227Q86WZ6 799 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 TICAM1Q8IUC6 712 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 SLC15A4Q8N697 577 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 MGARPQ8TDB4 240 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 SNRNP40Q96DI7 357 aaKnown RBP14.73□□□□□ -0.05
UPF3A-208ENST00000484246 MTERF3Q96E29 417 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 SIGLEC12Q96PQ1 595 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 RASL10BQ96S79 203 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 WWTR1Q9GZV5 400 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.73□□□□□ -0.05
UPF3A-208ENST00000484246 MIEF1Q9NQG6 463 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 LUZP4Q9P127 313 aa14.73□□□□□ -0.05
UPF3A-208ENST00000484246 ASH1LQ9NR48 2969 aaKnown RBP14.73□□□□□ -0.05
UPF3A-208ENST00000484246 TNRC6AQ8NDV7 1962 aaKnown RBP14.73□□□□□ -0.05
UPF3A-208ENST00000484246 OR2J2O76002 312 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 NADKO95544 446 aaPredicted RBP14.72□□□□□ -0.05
UPF3A-208ENST00000484246 PRPS2P11908 318 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 CD46P15529 392 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 SSTR4P31391 388 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 MLLT10P55197 1068 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 C21orf58P58505 322 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 GALNTL6Q49A17 601 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 PRR30Q53SZ7 412 aaPredicted RBP14.72□□□□□ -0.05
UPF3A-208ENST00000484246 PIGGQ5H8A4 983 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF766Q5HY98 468 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 DND1Q8IYX4 353 aaKnown RBP14.72□□□□□ -0.05
UPF3A-208ENST00000484246 THAP3Q8WTV1 239 aaPredicted RBP14.72□□□□□ -0.05
UPF3A-208ENST00000484246 TP53INP1Q96A56 240 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 EXOSC8Q96B26 276 aaKnown RBP14.72□□□□□ -0.05
UPF3A-208ENST00000484246 EGLN2Q96KS0 407 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 REEP4Q9H6H4 257 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms