RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 RASL10BQ96S79 203 aa17.05■□□□□ 0.32
SMIM4-204ENST00000482728 HES7Q9BYE0 225 aa17.05■□□□□ 0.32
SMIM4-204ENST00000482728 TIMMDC1Q9NPL8 285 aa17.05■□□□□ 0.32
SMIM4-204ENST00000482728 HPF1Q9NWY4 346 aa17.05■□□□□ 0.32
SMIM4-204ENST00000482728 CCL27Q9Y4X3 112 aa17.05■□□□□ 0.32
SMIM4-204ENST00000482728 POLR3HQ9Y535 204 aaPredicted RBP17.05■□□□□ 0.32
SMIM4-204ENST00000482728 PTGDR2Q9Y5Y4 395 aa17.05■□□□□ 0.32
SMIM4-204ENST00000482728 FLNCQ14315 2725 aa17.05■□□□□ 0.32
SMIM4-204ENST00000482728 ZGRF1Q86YA3 2104 aa17.05■□□□□ 0.32
SMIM4-204ENST00000482728 TENM4Q6N022 2769 aa17.05■□□□□ 0.32
SMIM4-204ENST00000482728 POLEQ07864 2286 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 ANKUB1A6NFN9 424 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 OR6C76A6NM76 312 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 TMEM233B4DJY2 109 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 CBX6O95503 412 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 SERPINE1P05121 402 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 PRPH2P23942 346 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 SSTR4P31391 388 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 SLC37A1P57057 533 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 MPEG1Q2M385 716 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 HLA-DQA1Q5Y7H0 255 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 OPN5Q6U736 354 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 IL20RBQ6UXL0 311 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 RNF165Q6ZSG1 346 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 Q6ZSR9 355 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 C9orf40Q8IXQ3 194 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 LRRC25Q8N386 305 aaPredicted RBP17.04■□□□□ 0.32
SMIM4-204ENST00000482728 ANKRD42Q8N9B4 389 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 EXOSC8Q96B26 276 aaKnown RBP17.04■□□□□ 0.32
SMIM4-204ENST00000482728 GAL3ST4Q96RP7 486 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 BRINP2Q9C0B6 783 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 TUBB1Q9H4B7 451 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 MIEF1Q9NQG6 463 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 EHD3Q9NZN3 535 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 ENTPD4Q9Y227 616 aa17.04■□□□□ 0.32
SMIM4-204ENST00000482728 UBR5O95071 2799 aaPredicted RBP17.04■□□□□ 0.32
SMIM4-204ENST00000482728 TMEM114B3SHH9 223 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 NME2P1O60361 137 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 OR6B1O95007 311 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 ATP1B1P05026 303 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 DHRS4L1P0CG22 281 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 EDN3P14138 238 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 NME2P22392 152 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 GRK2P25098 689 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 SOX3P41225 446 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 UQCRFS1P47985 274 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 MAGOHP61326 146 aaKnown RBP17.03■□□□□ 0.32
SMIM4-204ENST00000482728 FUT7Q11130 342 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 MAP4K2Q12851 820 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 MRPL49Q13405 166 aaKnown RBP17.03■□□□□ 0.32
SMIM4-204ENST00000482728 UGT3A2Q3SY77 523 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 PIGGQ5H8A4 983 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 FAM180BQ6P0A1 224 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.03■□□□□ 0.32
SMIM4-204ENST00000482728 ZNF227Q86WZ6 799 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 CCDC116Q8IYX3 515 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 VWA5B2Q8N398 1253 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 ADCY4Q8NFM4 1077 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 OR7G1Q8NGA0 311 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 OR6Y1Q8NGX8 325 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 SLC22A8Q8TCC7 542 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 NR4A3Q92570 626 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 CNRIP1Q96F85 164 aaPredicted RBP17.03■□□□□ 0.32
SMIM4-204ENST00000482728 BBS4Q96RK4 519 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 TMBIM4Q9HC24 238 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 MYNNQ9NPC7 610 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 SLC35C2Q9NQQ7 365 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 ARGLU1Q9NWB6 273 aaPredicted RBP17.03■□□□□ 0.32
SMIM4-204ENST00000482728 ZDHHC2Q9UIJ5 367 aa17.03■□□□□ 0.32
SMIM4-204ENST00000482728 KLF13Q9Y2Y9 288 aaPredicted RBP17.03■□□□□ 0.32
SMIM4-204ENST00000482728 C2orf92A0A1B0GVN3 265 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 TMEM120BA0PK00 339 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 NPIPB8E9PQR5 432 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 KLRC4-KLRK1H3BQV0 150 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 PIP5K1BO14986 540 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 CT62P0C5K7 136 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 DDCP20711 480 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 ARRB2P32121 409 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 MPIP34949 423 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 ABCE1P61221 599 aaKnown RBP17.02■□□□□ 0.32
SMIM4-204ENST00000482728 PMP22Q01453 160 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 KIAA0040Q15053 153 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 EIF2S3LQ2VIR3 472 aaKnown RBP17.02■□□□□ 0.32
SMIM4-204ENST00000482728 GALNTL6Q49A17 601 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 FAM71E1Q6IPT2 247 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 FAM111BQ6SJ93 734 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 TAGAPQ8N103 731 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 SLC15A4Q8N697 577 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 ST6GALNAC3Q8NDV1 305 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 OR2T11Q8NH01 316 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 PRR7Q8TB68 274 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 SGCZQ96LD1 299 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 ZNF681Q96N22 645 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 CCT7Q99832 543 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 WWTR1Q9GZV5 400 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 OR10A5Q9H207 317 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 NKIRAS1Q9NYS0 192 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 BCAP29Q9UHQ4 241 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 CFL2Q9Y281 166 aa17.02■□□□□ 0.32
SMIM4-204ENST00000482728 LRRK2Q5S007 2527 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms