RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CLPSP04118 112 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 MAPK1P28482 360 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 MLF1P58340 268 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 RNF4P78317 190 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 PTGR1Q14914 329 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 SPRED3Q2MJR0 410 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 HSP90B2PQ58FF3 399 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 ZNF468Q5VIY5 522 aaPredicted RBP18.91■□□□□ 0.62
CTSA-206ENST00000480961 SLC6A19Q695T7 634 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 SIMC1Q8NDZ2 872 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 OR9A2Q8NGT5 310 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 CKAP2Q8WWK9 683 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.91■□□□□ 0.62
CTSA-206ENST00000480961 ANKRA2Q9H9E1 313 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 MEAF6Q9HAF1 191 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 GIMAP4Q9NUV9 329 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 EHD3Q9NZN3 535 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 EIF3LQ9Y262 564 aaKnown RBP18.91■□□□□ 0.62
CTSA-206ENST00000480961 SPENQ96T58 3664 aaKnown RBP18.9■□□□□ 0.62
CTSA-206ENST00000480961 DYTNA2CJ06 578 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 GABRR3A8MPY1 467 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 G6PDP11413 515 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 PCSK2P16519 638 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 EPHA3P29320 983 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 GALNSP34059 522 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 SOX18P35713 384 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 CD96P40200 585 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 DIO3P55073 304 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 MRPS35P82673 323 aaKnown RBP18.9■□□□□ 0.62
CTSA-206ENST00000480961 EMX2Q04743 252 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 TUBA3CQ13748 450 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 EXOSC7Q15024 291 aaKnown RBP18.9■□□□□ 0.62
CTSA-206ENST00000480961 PRICKLE4Q2TBC4 344 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 TRMT12Q53H54 448 aaKnown RBP18.9■□□□□ 0.62
CTSA-206ENST00000480961 ZNF385BQ569K4 471 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 TUBA3EQ6PEY2 450 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 FAM47EQ6ZV65 393 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 MAVSQ7Z434 540 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 C9orf40Q8IXQ3 194 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 KIRREL3Q8IZU9 778 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 KRTCAP2Q8N6L1 136 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 HAS2Q92819 552 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 KAT2AQ92830 837 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 CIDECQ96AQ7 238 aaPredicted RBP18.9■□□□□ 0.62
CTSA-206ENST00000480961 ART5Q96L15 291 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 REEP4Q9H6H4 257 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 MAT2BQ9NZL9 334 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 SH3BP4Q9P0V3 963 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 B3GNT3Q9Y2A9 372 aa18.9■□□□□ 0.62
CTSA-206ENST00000480961 HEMK1Q9Y5R4 338 aaPredicted RBP18.9■□□□□ 0.62
CTSA-206ENST00000480961 PRRC2CQ9Y520 2896 aaKnown RBP18.9■□□□□ 0.62
CTSA-206ENST00000480961 MYO1GB0I1T2 1018 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 B8ZZF3 427 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 NME6O75414 186 aaPredicted RBP18.89■□□□□ 0.61
CTSA-206ENST00000480961 OR2J2O76002 312 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 ATP1B1P05026 303 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 EFNA1P20827 205 aaPredicted RBP18.89■□□□□ 0.61
CTSA-206ENST00000480961 S1PR1P21453 382 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 NCBP2P52298 156 aaKnown RBP eCLIP18.89■□□□□ 0.61
CTSA-206ENST00000480961 SLC37A1P57057 533 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 OC90Q02509 493 aaPredicted RBP18.89■□□□□ 0.61
CTSA-206ENST00000480961 SLC9B1Q4ZJI4 515 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 C6orf163Q5TEZ5 329 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 RNF111Q6ZNA4 994 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 Q6ZS92 163 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 PRICKLE2Q7Z3G6 844 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 HPS6Q86YV9 775 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 VWA5B2Q8N398 1253 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 Q8NA96 180 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 SUN3Q8TAQ9 357 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 PPCDCQ96CD2 204 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 GAL3ST4Q96RP7 486 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 SLAMF7Q9NQ25 335 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 ABI3Q9P2A4 366 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 BCAP29Q9UHQ4 241 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 DOCK10Q96BY6 2186 aa18.89■□□□□ 0.61
CTSA-206ENST00000480961 OR5H15A6NDH6 313 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 ZNF195O14628 629 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 SUV39H1O43463 412 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 ITGA10O75578 1167 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 PRPS2P11908 318 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 LBPP18428 481 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 MPIP34949 423 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 ASMTP46597 345 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 TNFSF10P50591 281 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 C19orf57Q0VDD7 668 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 FUT7Q11130 342 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 MAP4K2Q12851 820 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 DUSP8Q13202 625 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 MPEG1Q2M385 716 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 ZNF628Q5EBL2 1059 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 NXNQ6DKJ4 435 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 SPINK14Q6IE38 97 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 LARP4Q71RC2 724 aaKnown RBP eCLIP18.88■□□□□ 0.615e-11■■□□□ 11.8
CTSA-206ENST00000480961 ZNF615Q8N8J6 731 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 OR7A2PQ8NGA2 310 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 PIWIL2Q8TC59 973 aaKnown RBP18.88■□□□□ 0.61
CTSA-206ENST00000480961 PNPLA2Q96AD5 504 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 MAGEB18Q96M61 343 aa18.88■□□□□ 0.61
CTSA-206ENST00000480961 C7orf26Q96N11 449 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms