RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 CLPSP04118 112 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 IFNA16P05015 189 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 CPMP14384 443 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 PORP16435 677 aaPredicted RBP11.4□□□□□ -0.58
TRA2B-212ENST00000480461 EFNA1P20827 205 aaPredicted RBP11.4□□□□□ -0.58
TRA2B-212ENST00000480461 PIK3R1P27986 724 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 MAPK1P28482 360 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 WNT3P56703 355 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 C21orf58P58505 322 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 SLC26A5P58743 744 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 MAD2L1Q13257 205 aaPredicted RBP11.4□□□□□ -0.58
TRA2B-212ENST00000480461 SERTAD2Q14140 314 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 ELAVL1Q15717 326 aaKnown RBP11.4□□□□□ -0.58
TRA2B-212ENST00000480461 LTB4RQ15722 352 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 FAM111BQ6SJ93 734 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 APLFQ8IW19 511 aaPredicted RBP11.4□□□□□ -0.58
TRA2B-212ENST00000480461 ST13P4Q8IZP2 240 aaPredicted RBP11.4□□□□□ -0.58
TRA2B-212ENST00000480461 KIF2BQ8N4N8 673 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 APCDD1LQ8NCL9 501 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 ADCY4Q8NFM4 1077 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 ZNF721Q8TF20 911 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 KLHL29Q96CT2 875 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 CHMP6Q96FZ7 201 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 RBM18Q96H35 190 aaKnown RBP11.4□□□□□ -0.58
TRA2B-212ENST00000480461 SENP5Q96HI0 755 aaPredicted RBP11.4□□□□□ -0.58
TRA2B-212ENST00000480461 IP6K3Q96PC2 410 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 CCDC28BQ9BUN5 200 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 BRINP2Q9C0B6 783 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 ANKRA2Q9H9E1 313 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 CXorf21Q9HAI6 301 aa11.4□□□□□ -0.58
TRA2B-212ENST00000480461 PLEKHB1Q9UF11 243 aaPredicted RBP11.4□□□□□ -0.58
TRA2B-212ENST00000480461 PPIEQ9UNP9 301 aaKnown RBP11.4□□□□□ -0.58
TRA2B-212ENST00000480461 NSG1A0A0A6YYJ2 146 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 A0A0G2JND7 137 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 GMNCA6NCL1 334 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 TMEM200CA6NKL6 621 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 A6NL46 340 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 C17orf105B2RV13 164 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 K7EM74 188 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 SCAMP2O15127 329 aaKnown RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 UBDO15205 165 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 PRKNO60260 465 aaPredicted RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 MAN1A2O60476 641 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 SCN2BO60939 215 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 NME6O75414 186 aaPredicted RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 IGKV3-11P04433 115 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 ITGAMP11215 1152 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 TNNI3P19429 210 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 CSNK2A2P19784 350 aaPredicted RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 PRPS1L1P21108 318 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 GPX3P22352 226 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 FRKP42685 505 aaPredicted RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 ASMTP46597 345 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 CCL11P51671 97 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 SOX8P57073 446 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 GNGT1P63211 74 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 DUSP8Q13202 625 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 PRICKLE4Q2TBC4 344 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 TRMT12Q53H54 448 aaKnown RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 PLAG1Q6DJT9 500 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 ZNF551Q7Z340 670 aaPredicted RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 TMEM102Q8N9M5 508 aaPredicted RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 ELP5Q8TE02 316 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 STON2Q8WXE9 905 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 MIB2Q96AX9 1013 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 CTHRC1Q96CG8 243 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 ZNF764Q96H86 408 aaPredicted RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 AMDHD1Q96NU7 426 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 CATSPER2Q96P56 530 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 DGAT2Q96PD7 388 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 LPAR4Q99677 370 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 NPAS2Q99743 824 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 TUBB6Q9BUF5 446 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 NUDT9Q9BW91 350 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 TMEM120AQ9BXJ8 343 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 GLIPR2Q9H4G4 154 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 RABEP2Q9H5N1 569 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 ZNF385DQ9H6B1 395 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 ADAP2Q9NPF8 381 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 ATP13A2Q9NQ11 1180 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 SDR39U1Q9NRG7 319 aaPredicted RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 SH3BP4Q9P0V3 963 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 C19orf25Q9UFG5 118 aaPredicted RBP11.39□□□□□ -0.59
TRA2B-212ENST00000480461 MED13Q9UHV7 2174 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 ZNF639Q9UID6 485 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 PSME2Q9UL46 239 aa11.39□□□□□ -0.59
TRA2B-212ENST00000480461 SAGE2PA6NJ88 616 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 CEACAM4O75871 244 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 ATP1B1P05026 303 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 GALNSP34059 522 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 CD97P48960 835 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 PGDP52209 483 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 DGKQP52824 942 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 MAP4K2Q12851 820 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 BIKQ13323 160 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 RAPSNQ13702 412 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 ZNF267Q14586 743 aaPredicted RBP11.38□□□□□ -0.59
TRA2B-212ENST00000480461 BTBD16Q32M84 506 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 FHL5Q5TD97 284 aa11.38□□□□□ -0.59
TRA2B-212ENST00000480461 H3F3CQ6NXT2 135 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms