RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 CDCP2Q5VXM1 449 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 FBXW10Q5XX13 1052 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 PWWP2BQ6NUJ5 590 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 TMEM107Q6UX40 140 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 QSOX2Q6ZRP7 698 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 RNF130Q86XS8 419 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 SLC30A8Q8IWU4 369 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 ZZZ3Q8IYH5 903 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 ST13P4Q8IZP2 240 aaPredicted RBP11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 C10orf111Q8N326 155 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 C11orf65Q8NCR3 313 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 HIPK4Q8NE63 616 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 ZNF675Q8TD23 568 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 CLIP3Q96DZ5 547 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 RSRC1Q96IZ7 334 aaKnown RBP11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 SLC35G5Q96KT7 338 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 NSMCE2Q96MF7 247 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 YIPF2Q9BWQ6 316 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 RBCK1Q9BYM8 510 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 TMEM38AQ9H6F2 299 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 LANCL2Q9NS86 450 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 GPATCH2Q9NW75 528 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 NTMQ9P121 344 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 TRPC4Q9UBN4 977 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 FAF1Q9UNN5 650 aaPredicted RBP11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 USP22Q9UPT9 525 aa11.22□□□□□ -0.61
TM9SF4-206ENST00000479591 CACNA1HO95180 2353 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 TCRBV3S1A0A5B6 114 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 HYAL3O43820 417 aaPredicted RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 GDF9O60383 454 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 CPNE3O75131 537 aaKnown RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 TNFRSF21O75509 655 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 C1QCP02747 245 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 UMPSP11172 480 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 ETFAP13804 333 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 PCGF2P35227 344 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 MC3RP41968 323 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 STT3AP46977 705 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 PRIM2P49643 509 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 RAB15P59190 212 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 DSTNP60981 165 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 DCDP81605 110 aaKnown RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 ID2Q02363 134 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 COL9A2Q14055 689 aaPredicted RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 TRIP6Q15654 476 aaKnown RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 LTB4RQ15722 352 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 ZNF630Q2M218 657 aaPredicted RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 PRICKLE4Q2TBC4 344 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 COX20Q5RI15 118 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 C1orf189Q5VU69 101 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 IRAK1BP1Q5VVH5 260 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 CEACAM20Q6UY09 585 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 CYP2R1Q6VVX0 501 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 PTOV1Q86YD1 416 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 SPPL2CQ8IUH8 684 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 ENDOVQ8N8Q3 282 aaKnown RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 NUP43Q8NFH3 380 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 MIPOL1Q8TD10 442 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 DUS3LQ96G46 650 aaKnown RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 LIN37Q96GY3 246 aaPredicted RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 RBM18Q96H35 190 aaKnown RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 ZNF578Q96N58 590 aaPredicted RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 LRFN5Q96NI6 719 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 MS4A4EQ96PG1 132 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 DEPDC7Q96QD5 511 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 TGIF2Q9GZN2 237 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 RNPEPL1Q9HAU8 725 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 S100A14Q9HCY8 104 aa11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 DDX18Q9NVP1 670 aaKnown RBP11.21□□□□□ -0.61
TM9SF4-206ENST00000479591 GPR179Q6PRD1 2367 aa11.21□□□□□ -0.62
TM9SF4-206ENST00000479591 SPTBP11277 2137 aa11.21□□□□□ -0.62
TM9SF4-206ENST00000479591 MUC6Q6W4X9 2439 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 FRYLO94915 3013 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 IGLV3-12A0A075B6K2 115 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 TMEM247A6NEH6 219 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 ASNA1O43681 348 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 PLOD3O60568 738 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 CREG1O75629 220 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 CDC123O75794 336 aaPredicted RBP11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 KRT36O76013 467 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 TIAF1O95411 115 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 GPIP06744 558 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 ARAFP10398 606 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 NCK1P16333 377 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 HOXB6P17509 224 aaKnown RBP11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 AGXTP21549 392 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 MATN1P21941 496 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 RORAP35398 523 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 KHKP50053 298 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 PRKAG1P54619 331 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 MRPS22P82650 360 aaKnown RBP11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 MAP4K2Q12851 820 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 EIF3IQ13347 325 aaKnown RBP11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 ERV3-1Q14264 604 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 SNCBQ16143 134 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 ADRM1Q16186 407 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 ISXQ2M1V0 245 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 CCDC157Q569K6 752 aa11.2□□□□□ -0.62
TM9SF4-206ENST00000479591 INTS11Q5TA45 600 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms