RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 NUDT13Q86X67 352 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 ST13P4Q8IZP2 240 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-218ENST00000479554 PLD6Q8N2A8 252 aaKnown RBP13.25□□□□□ -0.29
ATG4B-218ENST00000479554 BANPQ8N9N5 519 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 WDR20Q8TBZ3 569 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 MGARPQ8TDB4 240 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 ACMSDQ8TDX5 336 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 ATP6V1E2Q96A05 226 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 PHF21BQ96EK2 531 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 APOPT1Q96IL0 206 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 ZNF717Q9BY31 904 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-218ENST00000479554 DDX31Q9H8H2 851 aaKnown RBP13.25□□□□□ -0.29
ATG4B-218ENST00000479554 ZDHHC11Q9H8X9 412 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 WDR41Q9HAD4 459 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 ZNF358Q9NW07 568 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 TMCO1Q9UM00 188 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 ASB4Q9Y574 426 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 GTF3C1Q12789 2109 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 PDZD2O15018 2839 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 HRKO00198 91 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 FOXE1O00358 373 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-218ENST00000479554 OR7A17O14581 309 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 TM9SF1O15321 606 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 TMPRSS11DO60235 418 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 SMIM24O75264 130 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 GLSO94925 669 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-218ENST00000479554 GPR75O95800 540 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 RBP1P09455 135 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 PYGBP11216 843 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 BSGP35613 385 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 MAGEA12P43365 314 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 DNASE1L1P49184 302 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 NR0B1P51843 470 aaKnown RBP13.24□□□□□ -0.29
ATG4B-218ENST00000479554 NEK2P51955 445 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 CCNG1P51959 295 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 HERVK_113P63132 956 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 ERVK-8P63133 956 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 SPRED3Q2MJR0 410 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 TSNAXIP1Q2TAA8 658 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 PIGGQ5H8A4 983 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 RNF111Q6ZNA4 994 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 SH2D5Q6ZV89 423 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 SLC29A4Q7RTT9 530 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 FAM109AQ8N4B1 249 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 MARVELD2Q8N4S9 558 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 TMEM251Q8N6I4 163 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 OR52B6Q8NGF0 335 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 ISL2Q96A47 359 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 CDK15Q96Q40 435 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 GAL3ST4Q96RP7 486 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 SERPINI1Q99574 410 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 ERVK-6Q9BXR3 956 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 TRIM8Q9BZR9 551 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 NOL11Q9H8H0 719 aaKnown RBP13.24□□□□□ -0.29
ATG4B-218ENST00000479554 IL1RL2Q9HB29 575 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 MKS1Q9NXB0 559 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 XPR1Q9UBH6 696 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 ERVK-19Q9WJR5 959 aa13.24□□□□□ -0.29
ATG4B-218ENST00000479554 CACNA1CQ13936 2221 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 A0A1W2PR48 441 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 GMNCA6NCL1 334 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 GLOD5A6NK44 160 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 NPIPA2E9PIF3 369 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 NPIPA3F8WFD2 350 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 STX16-NPEPL1H3BU86 382 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 GOLGA8RI6L899 631 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 COPEO14579 308 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 STX16O14662 325 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 SEMA3DO95025 777 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 AIFM1O95831 613 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 MAGEA5P43359 124 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 KIR3DL1P43629 444 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 ZNF267Q14586 743 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-218ENST00000479554 ZNF791Q3KP31 576 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-218ENST00000479554 HHATQ5VTY9 493 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 OR52E8Q6IFG1 317 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 SLC15A4Q8N697 577 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 DOK4Q8TEW6 326 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 CKAP2Q8WWK9 683 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 ASB5Q8WWX0 329 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 RIT1Q92963 219 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 SPACA9Q96E40 222 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-218ENST00000479554 IQCGQ9H095 443 aaKnown RBP13.23□□□□□ -0.29
ATG4B-218ENST00000479554 TUBA8Q9NY65 449 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-218ENST00000479554 PCTPQ9UKL6 214 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 HRH3Q9Y5N1 445 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 LIPGQ9Y5X9 500 aa13.23□□□□□ -0.29
ATG4B-218ENST00000479554 OR14I1A6ND48 311 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 OR6C76A6NM76 312 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 BCKDKO14874 412 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 NADKO95544 446 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-218ENST00000479554 IGHG3P01860 377 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 GBAP04062 536 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 COL6A2P12110 1019 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 SSTR2P30874 369 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 CHRNB4P30926 498 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 PIGAP37287 484 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 SLC37A1P57057 533 aa13.22□□□□□ -0.29
ATG4B-218ENST00000479554 WDR4P57081 412 aaKnown RBP13.22□□□□□ -0.29
ATG4B-218ENST00000479554 FOXO1Q12778 655 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms