RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 FAHP16930 419 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 M6PRP20645 277 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 PTPN4P29074 926 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 ETV4P43268 484 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 RPL5P46777 297 aaKnown RBP5.85□□□□□ -1.47
SF3B1-209ENST00000479532 AVPR1BP47901 424 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 KRT6CP48668 564 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 RAP1GDS1P52306 607 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 CDH13P55290 713 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 ARF3P61204 181 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-209ENST00000479532 CYP4F2P78329 520 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 MEF2AQ02078 507 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF33BQ06732 778 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 RIPPLY1Q0D2K3 151 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 STX3Q13277 289 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 DDX39BQ13838 428 aaKnown RBP5.85□□□□□ -1.47
SF3B1-209ENST00000479532 SLC9A5Q14940 896 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 CHI3L2Q15782 390 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 UNC50Q53HI1 259 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 FRMPD2BQ6IN97 320 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 PRMT9Q6P2P2 845 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 FBXO42Q6P3S6 717 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 TRIM40Q6P9F5 258 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 AAGABQ6PD74 315 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 PLD3Q8IV08 490 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 LRRC34Q8IZ02 419 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 ESX1Q8N693 406 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 BMPERQ8N8U9 685 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 L3MBTL4Q8NA19 623 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 SRFBP1Q8NEF9 429 aaKnown RBP5.85□□□□□ -1.47
SF3B1-209ENST00000479532 OR4F6Q8NGB9 312 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 OR1L3Q8NH93 324 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 PROKR1Q8TCW9 393 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 EME1Q96AY2 570 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 MVB12AQ96EY5 273 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 CMTM7Q96FZ5 175 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 FAR2Q96K12 515 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 SLC46A1Q96NT5 459 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 OR2A5Q96R48 311 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 CTRCQ99895 268 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 EFHD1Q9BUP0 239 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 MECRQ9BV79 373 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 SLC29A3Q9BZD2 475 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 KLHL4Q9C0H6 718 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 ROGDIQ9GZN7 287 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 C12orf65Q9H3J6 166 aaKnown RBP5.85□□□□□ -1.47
SF3B1-209ENST00000479532 GSTO2Q9H4Y5 243 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 COPS7BQ9H9Q2 264 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-209ENST00000479532 APMAPQ9HDC9 416 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 MID1IP1Q9NPA3 183 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 INIPQ9NRY2 104 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 RHBDL2Q9NX52 303 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 SH2B3Q9UQQ2 575 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 ASB1Q9Y576 335 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.85□□□□□ -1.47
SF3B1-209ENST00000479532 MDC1Q14676 2089 aaKnown RBP5.85□□□□□ -1.47
SF3B1-209ENST00000479532 CEP250Q9BV73 2442 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 LOC105369274A0A096LPK9 316 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 LOC102723532A0A0G2JNH3 316 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 A0A1B0GX78 115 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 OR14I1A6ND48 311 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 CDRT15L2A8MXV6 281 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 FAM25EA8MYX2 175 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 CENPBD1B2RD01 187 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 C9J4A7 227 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 FOXE1O00358 373 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 OR7A17O14581 309 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 DSCR3O14972 297 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 PEX1O43933 1283 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 LCMT2O60294 686 aaKnown RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 CCDC22O60826 627 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 FKBP6O75344 327 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 STK17BO94768 372 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 OR4F21O95013 312 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 CAPN1P07384 714 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 SERPINA6P08185 405 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 UROSP10746 265 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 LIPCP11150 499 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 HSD3B1P14060 373 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 TSPAN8P19075 237 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 EPORP19235 508 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 BGNP21810 368 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 SERPINB3P29508 390 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 SLC5A2P31639 672 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 ETV5P41161 510 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 PIK3CBP42338 1070 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 GABRA4P48169 554 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 TMED10P49755 219 aaKnown RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 HNRNPFP52597 415 aaKnown RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 NUP107P57740 925 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 ABCE1P61221 599 aaKnown RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 YBX1P67809 324 aaKnown RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 ABHD18Q0P651 414 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 GALNT1Q10472 559 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-209ENST00000479532 TRAF3Q13114 568 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 E2F2Q14209 437 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 HERC3Q15034 1050 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 IMPG1Q17R60 797 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 TMEM35AQ53FP2 167 aa5.84□□□□□ -1.47
SF3B1-209ENST00000479532 TOR1AIP1Q5JTV8 583 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms