RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 TPST2O60704 377 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 LGI1O95970 557 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 GSTM3P21266 225 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 OPRD1P41143 372 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 KHKP50053 298 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 RUNX1T1Q06455 604 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 TMEM35AQ53FP2 167 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 FAM46CQ5VWP2 391 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 PRR23CQ6ZRP0 262 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 FNDC11Q9BVV2 318 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 POLR2J2Q9GZM3 115 aaKnown RBP23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 FBXL12Q9NXK8 326 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 KLHL20Q9Y2M5 609 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 CAB39Q9Y376 341 aaPredicted RBP23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 A0A0A6YYD5 115 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 NR2F1P10589 423 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 CKMT1AP12532 417 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 FEN1P39748 380 aaKnown RBP23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 SOX3P41225 446 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 ENTPD8Q5MY95 495 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 AGAP6Q5VW22 663 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 PRAMEF8Q5VWM4 474 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 PRAMEF7Q5VXH5 474 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 OR4C11Q6IEV9 310 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 PODNL1Q6PEZ8 512 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 UBE3DQ7Z6J8 389 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 RBM45Q8IUH3 476 aaKnown RBP23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 SFXN5Q8TD22 340 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 AGAP4Q96P64 663 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 FAIM2Q9BWQ8 316 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 HOXD1Q9GZZ0 328 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 OR51I1Q9H343 314 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 MRPS18AQ9NVS2 196 aaKnown RBP23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 SLC23A2Q9UGH3 650 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 PCDHGB2Q9Y5G2 931 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 PCYT1BQ9Y5K3 369 aaPredicted RBP23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 A0A1W2PPV9 198 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 GPR89AB7ZAQ6 455 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 C1QTNF3-AMACRE9PGA6 284 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 H7BY64 318 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 RAB36O95755 333 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 IL1AP01583 271 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 HBQ1P09105 142 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 GPR89BP0CG08 455 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 OR12D1P0DN82 309 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 KLHL22Q53GT1 634 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 C1orf94Q6P1W5 598 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 BHLHB9Q6PI77 547 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 ING5Q8WYH8 240 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 AMDHD1Q96NU7 426 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 PRAP1Q96NZ9 151 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 TMEM245Q9H330 911 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 DEC1Q9P2X7 70 aa23.28■■□□□ 1.32
SYNGAP1-206ENST00000479510 MUC22E2RYF6 1773 aaPredicted RBP23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 DENND4AQ7Z401 1863 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 CASC3O15234 703 aaKnown RBP23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 FGBP02675 491 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 IGFBP1P08833 259 aaPredicted RBP23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 SYPL1Q16563 259 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 C3orf38Q5JPI3 329 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 TMPRSS11AQ6ZMR5 421 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 PHC2Q8IXK0 858 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 PLA2G15Q8NCC3 412 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 PRRC1Q96M27 445 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 BARHL1Q9BZE3 327 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 GLIPR2Q9H4G4 154 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 ISYNA1Q9NPH2 558 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 TEX10Q9NXF1 929 aaPredicted RBP23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 TESQ9UGI8 421 aaKnown RBP23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 ACSL5Q9ULC5 683 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 MRPS23Q9Y3D9 190 aaKnown RBP23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 PRKAB1Q9Y478 270 aa23.27■■□□□ 1.32
SYNGAP1-206ENST00000479510 PRAMEF27A3QJZ7 478 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 SNTNA6NMZ2 147 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 OR1F1O43749 312 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 NFATC1O95644 943 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 GIPRP48546 466 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 EFNB1P98172 346 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 UBE3AQ05086 875 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 FOXD4Q12950 439 aaPredicted RBP23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 TMEM53Q6P2H8 277 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 CLDN22Q8N7P3 220 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 TRIM43Q96BQ3 446 aaPredicted RBP23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 MOAP1Q96BY2 351 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 OR2A14Q96R47 310 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 SLC35C2Q9NQQ7 365 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 TVP23BQ9NYZ1 205 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 CCDC88CQ9P219 2028 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 FEZF1A0PJY2 475 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 CPEP16870 476 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 TNNI3P19429 210 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 NTSP30990 170 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 DGKEP52429 567 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 ARFIP1P53367 373 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 PSPHP78330 225 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 CSNK1G2P78368 415 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 CDK3Q00526 305 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 CDK5Q00535 292 aa23.26■■□□□ 1.31
SYNGAP1-206ENST00000479510 BNC1Q01954 994 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms