RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 VPS29Q9UBQ0 182 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 HAO1Q9UJM8 370 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 TSC22D4Q9Y3Q8 395 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 INTS1Q8N201 2190 aaKnown RBP13.52□□□□□ -0.24
USP11-207ENST00000478596 A0A0A6YYC8 382 aaPredicted RBP13.52□□□□□ -0.25
USP11-207ENST00000478596 GOLGA8QA0A0J9YX86 632 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 ATP6AP2A0A1C7CYW4 349 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 GNG14A0A1W2PPG7 69 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 GOLGA8OA6NCC3 632 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 FAM90A27PA6NNH2 459 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 GOLGA8NF8WBI6 632 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 I3L1I5 382 aaPredicted RBP13.52□□□□□ -0.25
USP11-207ENST00000478596 DSCR3O14972 297 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 B3GALT2O43825 422 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 SEC22BO75396 215 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 ATP6AP2O75787 350 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 RSL1D1O76021 490 aaKnown RBP13.52□□□□□ -0.25
USP11-207ENST00000478596 ALOX12P18054 663 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 FBLP22087 321 aaKnown RBP13.52□□□□□ -0.25
USP11-207ENST00000478596 BTN3A2P78410 334 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 KLC1Q07866 573 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 PRTGQ2VWP7 1150 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 ABHD17BQ5VST6 288 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 TMEM214Q6NUQ4 689 aaKnown RBP13.52□□□□□ -0.25
USP11-207ENST00000478596 NIPAL1Q6NVV3 410 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 CYP20A1Q6UW02 462 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 CPLX4Q7Z7G2 160 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 MARVELD2Q8N4S9 558 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 C1orf52Q8N6N3 182 aaKnown RBP13.52□□□□□ -0.25
USP11-207ENST00000478596 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.52□□□□□ -0.25
USP11-207ENST00000478596 MS4A6EQ96DS6 147 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 PPP3R2Q96LZ3 170 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 C10orf90Q96M02 699 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 QRFPRQ96P65 431 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 EBPLQ9BY08 206 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 KLHL31Q9H511 634 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 LRTM1Q9HBL6 345 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 RASSF1Q9NS23 344 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 DCTN4Q9UJW0 460 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 ADAM21Q9UKJ8 722 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 CDC14AQ9UNH5 594 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 RNF6Q9Y252 685 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 NAALAD2Q9Y3Q0 740 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 SPACA6W5XKT8 324 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 HCFC1P51610 2035 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 SCN2AQ99250 2005 aa13.52□□□□□ -0.25
USP11-207ENST00000478596 A0A0G2JND7 137 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 FITM1A5D6W6 292 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 LRIT2A6NDA9 550 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 RTCAO00442 366 aaKnown RBP13.51□□□□□ -0.25
USP11-207ENST00000478596 PLPP1O14494 284 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 PCDH7O60245 1069 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 PEX11AO75192 247 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 RDH16O75452 317 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 SEMA3DO95025 777 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 ETHE1O95571 254 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 JUNP05412 331 aaKnown RBP13.51□□□□□ -0.25
USP11-207ENST00000478596 CERS1P27544 350 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 MAPK1P28482 360 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 AQP5P55064 265 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 AP2B1P63010 937 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 CUL3Q13618 768 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 DEPDC1Q5TB30 811 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 MFSD4BQ5TF39 518 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 TMEM211Q6ICI0 200 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 COMMD6Q7Z4G1 85 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 FGD2Q7Z6J4 655 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 FNDC5Q8NAU1 212 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 OR9A4Q8NGU2 314 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 UTP15Q8TED0 518 aaKnown RBP13.51□□□□□ -0.25
USP11-207ENST00000478596 TM4SF19Q96DZ7 209 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 RILPQ96NA2 401 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 FRMD6Q96NE9 622 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 ZNF285Q96NJ3 590 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 TBCDQ9BTW9 1192 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 C1orf50Q9BV19 199 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 TUBB1Q9H4B7 451 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 RABEP2Q9H5N1 569 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 ENAMQ9NRM1 1142 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 C1orf109Q9NX04 203 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 FAM53CQ9NYF3 392 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 HCN3Q9P1Z3 774 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 LRFN1Q9P244 771 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 C3orf18Q9UK00 162 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 L3MBTL1Q9Y468 752 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 POLR3HQ9Y535 204 aaPredicted RBP13.51□□□□□ -0.25
USP11-207ENST00000478596 MAU2Q9Y6X3 613 aa13.51□□□□□ -0.25
USP11-207ENST00000478596 HRNRQ86YZ3 2850 aaPredicted RBP13.51□□□□□ -0.25
USP11-207ENST00000478596 IDSB3KWA1 339 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 SGK494L7N484 410 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 PSMD12O00232 456 aaPredicted RBP13.5□□□□□ -0.25
USP11-207ENST00000478596 ZNHIT1O43257 154 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 B3GALT4O96024 378 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 GBAP04062 536 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 EPHA3P29320 983 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 MAPK12P53778 367 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 MTTPP55157 894 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 OLR1P78380 273 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 HSF1Q00613 529 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms