RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CCDC197Q8NCU1 140 aa1.54□□□□□ -2.16
HPS3-205ENST00000478525 MRPS27Q92552 414 aaKnown RBP1.54□□□□□ -2.16
HPS3-205ENST00000478525 GLT8D2Q9H1C3 349 aa1.54□□□□□ -2.16
HPS3-205ENST00000478525 CXXC4Q9H2H0 198 aa1.54□□□□□ -2.16
HPS3-205ENST00000478525 Q9HAA7 133 aa1.54□□□□□ -2.16
HPS3-205ENST00000478525 FAM212BQ9NTI7 297 aaPredicted RBP1.54□□□□□ -2.16
HPS3-205ENST00000478525 CIDEBQ9UHD4 219 aa1.54□□□□□ -2.16
HPS3-205ENST00000478525 GMEB2Q9UKD1 530 aa1.54□□□□□ -2.16
HPS3-205ENST00000478525 PFASO15067 1338 aa1.54□□□□□ -2.16
HPS3-205ENST00000478525 A0A1B0GUA9 196 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 CCDC188H7C350 402 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 SLC17A2O00624 439 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 GFPT2O94808 682 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 STARD3NLO95772 234 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 NUDT14O95848 222 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 SLC26A2P50443 739 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 DCAF4L1Q3SXM0 396 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 GLYR1Q49A26 553 aaPredicted RBP1.53□□□□□ -2.16
HPS3-205ENST00000478525 TMEM182Q6ZP80 229 aaPredicted RBP1.53□□□□□ -2.16
HPS3-205ENST00000478525 MOB2Q70IA6 237 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 PRSS48Q7RTY5 328 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 DNAJB7Q7Z6W7 309 aaPredicted RBP1.53□□□□□ -2.16
HPS3-205ENST00000478525 PRPF39Q86UA1 669 aaKnown RBP1.53□□□□□ -2.16
HPS3-205ENST00000478525 OR6J1Q8NGC5 347 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 OCC1Q8TAD7 63 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 RIT1Q92963 219 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 FAM129AQ9BZQ8 928 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 ELOVL4Q9GZR5 314 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 MINDY3Q9H8M7 445 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 OR1A2Q9Y585 309 aa1.53□□□□□ -2.16
HPS3-205ENST00000478525 ACEP12821 1306 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 IGLV4-60A0A075B6I1 120 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 GTPBP10A4D1E9 387 aaKnown RBP1.52□□□□□ -2.17
HPS3-205ENST00000478525 FAM86B1E9PN63 330 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 ALPIP09923 528 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 FAM86B2P0C5J1 330 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 UCP1P25874 307 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 OR1D2P34982 312 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 CCR4P51679 360 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 DAZ2Q13117 558 aaKnown RBP1.52□□□□□ -2.17
HPS3-205ENST00000478525 PSMD6Q15008 389 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 PM20D1Q6GTS8 502 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 IGFL1Q6UW32 110 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 Q6ZRG5 221 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 PHLDB2Q86SQ0 1253 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 ZNF547Q8IVP9 402 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 CADM2Q8N3J6 435 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 BBS1Q8NFJ9 593 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 BIRC7Q96CA5 298 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 SLC35E1Q96K37 410 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 C9orf85Q96MD7 179 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 DPH7Q9BTV6 452 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 TRIM9Q9C026 710 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 DAZ3Q9NR90 486 aaKnown RBP1.52□□□□□ -2.17
HPS3-205ENST00000478525 PLEK2Q9NYT0 353 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 BCCIPQ9P287 314 aaKnown RBP eCLIP1.52□□□□□ -2.17
HPS3-205ENST00000478525 SLC2A6Q9UGQ3 507 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 LEF1Q9UJU2 399 aaPredicted RBP1.52□□□□□ -2.17
HPS3-205ENST00000478525 RNF115Q9Y4L5 304 aa1.52□□□□□ -2.17
HPS3-205ENST00000478525 SLIT3O75094 1523 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 K7ERI5 159 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 MMP23AO75900 390 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 TBPP20226 339 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 IGFBP5P24593 272 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 OR1D4P47884 311 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 PAX5Q02548 391 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 EGFEM1PQ0D2K5 195 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 MOBPQ13875 183 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 ZNF273Q14593 569 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 HYAL4Q2M3T9 481 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 SPOUT1Q5T280 376 aaKnown RBP1.51□□□□□ -2.17
HPS3-205ENST00000478525 SPATA1Q5VX52 437 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 KRT80Q6KB66 452 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 ITIH5Q86UX2 942 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 C17orf64Q86WR6 236 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 DCAF4L2Q8NA75 395 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 CCSER1Q9C0I3 900 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 ANKRD2Q9GZV1 360 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 Q9H3A6 140 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 ST6GALNAC4Q9H4F1 302 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 DNAJC11Q9NVH1 559 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 KIF26AQ9ULI4 1882 aaPredicted RBP1.51□□□□□ -2.17
HPS3-205ENST00000478525 OTOGLQ3ZCN5 2332 aa1.51□□□□□ -2.17
HPS3-205ENST00000478525 ATP6AP2A0A1C7CYW4 349 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 WNT2P09544 360 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 IGHV1-2P23083 117 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 ALDH3B2P48448 385 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 SLC7A2P52569 658 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 AIMP1Q12904 312 aaKnown RBP1.5□□□□□ -2.17
HPS3-205ENST00000478525 COG2Q14746 738 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 MEF2DQ14814 521 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 P2RY14Q15391 338 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 KPRPQ5T749 579 aaPredicted RBP1.5□□□□□ -2.17
HPS3-205ENST00000478525 ZFP2Q6ZN57 461 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 ANKRD46Q86W74 232 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 CCAR2Q8N163 923 aaKnown RBP1.5□□□□□ -2.17
HPS3-205ENST00000478525 OR10H4Q8NGA5 316 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 GOLGA5Q8TBA6 731 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 FBXO25Q8TCJ0 367 aa1.5□□□□□ -2.17
HPS3-205ENST00000478525 DEDD2Q8WXF8 326 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms