RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SYTL1Q8IYJ3 562 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 METTL4Q8N3J2 472 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 CELF5Q8N6W0 485 aaKnown RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF513Q8N8E2 541 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 NAT16Q8N8M0 369 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 MRPL43Q8N983 215 aaKnown RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 LINC01356Q8N9X3 169 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 MINDY2Q8NBR6 621 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF540Q8NDQ6 660 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 TMIEQ8NEW7 156 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 GPR156Q8NFN8 814 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ABHD11Q8NFV4 315 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 OR10Q1Q8NGQ4 319 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.7□□□□□ -1.664e-15■■■■□ 19.8
SF3B6-202ENST00000478050 SPPL2AQ8TCT8 520 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 C16orf78Q8WTQ4 265 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PHF10Q8WUB8 498 aaKnown RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 CHPT1Q8WUD6 406 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF480Q8WV37 535 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 SLC5A11Q8WWX8 675 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 OR8D1Q8WZ84 308 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 NEIL2Q969S2 332 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PPCDCQ96CD2 204 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 NUS1Q96E22 293 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 VMP1Q96GC9 406 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 TPD52L3Q96J77 140 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 SIGLEC11Q96RL6 698 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 CSF3RQ99062 836 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 SMAD5Q99717 465 aaKnown RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 BARD1Q99728 777 aaKnown RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 TCF25Q9BQ70 676 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PSD2Q9BQI7 771 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 SLC35A5Q9BS91 424 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 LINC00597Q9H2U6 94 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 TRIM39Q9HCM9 518 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 GP6Q9HCN6 339 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 LTB4R2Q9NPC1 389 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 DMRT3Q9NQL9 472 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 CCDC177Q9NQR7 707 aaPredicted RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 THSD1Q9NS62 852 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 PLCXD1Q9NUJ7 323 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 EXD2Q9NVH0 621 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 AHSPQ9NZD4 102 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 SH3BP4Q9P0V3 963 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ERVK-18Q9QC07 812 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ANGPT4Q9Y264 503 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 BTBD3Q9Y2F9 522 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 POFUT2Q9Y2G5 429 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 SLC27A6Q9Y2P4 619 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 WBP11Q9Y2W2 641 aaKnown RBP4.7□□□□□ -1.66
SF3B6-202ENST00000478050 WNT6Q9Y6F9 365 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 MYO18BQ8IUG5 2567 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 TRPM6Q9BX84 2022 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 ATG2AQ2TAZ0 1938 aa4.7□□□□□ -1.66
SF3B6-202ENST00000478050 DNAH14Q0VDD8 3507 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CKAP5Q14008 2032 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 EDDM13A0A1B0GTR0 161 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ARRDC5A6NEK1 342 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CLDN24A6NM45 220 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CYSRT1A8MQ03 144 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 K7ESM1 405 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 M0R3G1 203 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 KPNA3O00505 521 aaPredicted RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 MAGEB3O15480 346 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 AKAP8O43823 692 aaKnown RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 TBX19O60806 448 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 WBP4O75554 376 aaKnown RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 RFPL2O75678 378 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SULT1C4O75897 302 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SEMA3DO95025 777 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 FADS2O95864 444 aaKnown RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 C6orf47O95873 294 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 C1QCP02747 245 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 RPN2P04844 631 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CYP17A1P05093 508 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 PROS1P07225 676 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 HNRNPCP07910 306 aaKnown RBP eCLIP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 OCM2P0CE71 109 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 OCMP0CE72 109 aaPredicted RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 NPPBP16860 134 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CPEP16870 476 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 UQCRC2P22695 453 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 KELP23276 732 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CXCR2P25025 360 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 PSMB9P28065 219 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 PDHA2P29803 388 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CD6P30203 668 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SERPINB1P30740 379 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 KRT20P35900 424 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CHI3L1P36222 383 aaPredicted RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 GGT2P36268 569 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 HSD17B2P37059 387 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 OPRL1P41146 370 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CRATP43155 626 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 MAP2K4P45985 399 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 GPR1P46091 355 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 GSTM5P46439 218 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 PRIM2P49643 509 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 MVDP53602 400 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 HBA1P69905 142 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms