RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TMEM233B4DJY2 109 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 SCAMP3O14828 347 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 CASC3O15234 703 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 EFCAB14O75071 495 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 HEXAP06865 529 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 HIST1H2AGP0C0S8 130 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 SLC2A2P11168 524 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 HIST1H2ADP20671 130 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 DCTP40126 519 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 IRF4Q15306 451 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 NR6A1Q15406 480 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 KCTD11Q693B1 232 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 HIST2H2AA3Q6FI13 130 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 OR5M10Q6IEU7 315 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 FAM111BQ6SJ93 734 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 HSDL2Q6YN16 418 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 ABI3BPQ7Z7G0 1075 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 TMEM17Q86X19 198 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 SPAG16Q8N0X2 631 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 C9orf43Q8TAL5 461 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 OVCA2Q8WZ82 227 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 DIRAS2Q96HU8 199 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 HIST1H2AHQ96KK5 128 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 OR2M2Q96R28 347 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 HIST1H2AJQ99878 128 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 ASPNQ9BXN1 380 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 SLC39A8Q9C0K1 460 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 CHRDQ9H2X0 955 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 KLHL31Q9H511 634 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 TCF7L1Q9HCS4 588 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 OR6C2Q9NZP2 312 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 MPP6Q9NZW5 540 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 FBXO10Q9UK96 956 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 FBXL21Q9UKT6 434 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 DLGAP4Q9Y2H0 992 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 MEIKINA0A087WXM9 373 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 H7C0S8 307 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 TLR5O60602 858 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 MAFKO60675 156 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 LILRB3O75022 631 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 MITFO75030 526 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 SDC3O75056 442 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 VNN2O95498 520 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 CXCL14O95715 111 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 SERPINA1P01009 418 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 IFNA2P01563 188 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 CRYBA1P05813 215 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 CLTBP09497 229 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 CNPP09543 421 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 SBK3P0C264 359 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 OR1D2P34982 312 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 RGS19P49795 217 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 MNX1P50219 401 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 DCDP81605 110 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 DHODHQ02127 395 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 EIF4HQ15056 248 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 MS4A13Q5J8X5 152 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 AFMIDQ63HM1 303 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 FAM217AQ8IXS0 508 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 UMODL1-AS1Q8N2C9 162 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 SVBPQ8N300 66 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 MIER2Q8N344 545 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 DNAJC22Q8N4W6 341 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 EFHBQ8N7U6 833 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 NKAIN3Q8N8D7 197 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 C2CD4CQ8TF44 421 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 ZDHHC1Q8WTX9 485 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 ARNTL2Q8WYA1 636 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 TMEM169Q96HH4 297 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 ZNF558Q96NG5 402 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 KATNB1Q9BVA0 655 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 LRRC3Q9BY71 257 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 BARHL1Q9BZE3 327 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 CRISPLD1Q9H336 500 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 TASP1Q9H6P5 420 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 CWH43Q9H720 699 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 TMEM248Q9NWD8 314 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 PSORS1C1Q9UIG5 152 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 PLEKHA6Q9Y2H5 1048 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 GREB1Q4ZG55 1949 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 RFPL4AA6NLU0 287 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 NEDD8-MDP1E9PL57 170 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 RFPL4AL1F8VTS6 287 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 SLC7A4O43246 635 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 LCMT2O60294 686 aaKnown RBP12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 CACNG3O60359 315 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 KRT33AO76009 404 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 EFEMP2O95967 443 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 SOD2P04179 222 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 RHCEP18577 417 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 C1QTNF8P60827 252 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 GK2Q14410 553 aaPredicted RBP12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 VPS26BQ4G0F5 336 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 FAM74A1Q5RGS3 127 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 DDI2Q5TDH0 399 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 FSTL4Q6MZW2 842 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 NPSR1Q6W5P4 371 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 KANSL1Q7Z3B3 1105 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 KLBQ86Z14 1044 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms