RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TMPRSS11FQ6ZWK6 438 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 CYB5R4Q7L1T6 521 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 LHFPL4Q7Z7J7 247 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 FJX1Q86VR8 437 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 LONP2Q86WA8 852 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 ADHFE1Q8IWW8 467 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 DSELQ8IZU8 1212 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 RNF10Q8N5U6 811 aaKnown RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 FNDC5Q8NAU1 212 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 CPEB3Q8NE35 698 aaKnown RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 GPRC5AQ8NFJ5 357 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 OR4K14Q8NGD5 310 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 OR10Q1Q8NGQ4 319 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 SPATA22Q8NHS9 363 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 GRHL3Q8TE85 626 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 TNFRSF14Q92956 283 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 SLCO2A1Q92959 643 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 IRF7Q92985 503 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 RAB39BQ96DA2 213 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 CHMP6Q96FZ7 201 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 KAZALD1Q96I82 304 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 HPDLQ96IR7 371 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 ZNF479Q96JC4 524 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 LRR1Q96L50 414 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 VSTM2LQ96N03 204 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 PANX1Q96RD7 426 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 CCNL2Q96S94 520 aaPredicted RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 CCT8L2Q96SF2 557 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 PRMT1Q99873 361 aaKnown RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 RTP3Q9BQQ7 232 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 ZSWIM1Q9BR11 485 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 ACBD6Q9BR61 282 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 BTBD10Q9BSF8 475 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 NUSAP1Q9BXS6 441 aaKnown RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 GSDMCQ9BYG8 508 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 ROPN1BQ9BZX4 212 aaPredicted RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 STRADBQ9C0K7 418 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 ZMYND12Q9H0C1 365 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 GAL3ST2Q9H3Q3 398 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 DPEP3Q9H4B8 488 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 ACTL8Q9H568 366 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 FAM124BQ9H5Z6 455 aaPredicted RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 LRRC4Q9HBW1 653 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 TXLNGQ9NUQ3 528 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 PCMTD2Q9NV79 361 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 C19orf73Q9NVV2 129 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 CISD1Q9NZ45 108 aaKnown RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 PIPOXQ9P0Z9 390 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 RCC2Q9P258 522 aaKnown RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 STOX2Q9P2F5 926 aaPredicted RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 UXTQ9UBK9 157 aaPredicted RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 P2RX2Q9UBL9 471 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 ERRFI1Q9UJM3 462 aaPredicted RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 NOCTQ9UK39 431 aaKnown RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 ADAM28Q9UKQ2 775 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 TBC1D24Q9ULP9 559 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 PLA2G2DQ9UNK4 145 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 B9D1Q9UPM9 204 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 AK9Q5TCS8 1911 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 PALLDQ8WX93 1383 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 COL2A1P02458 1487 aaPredicted RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 COL5A2P05997 1499 aaPredicted RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 COL18A1P39060 1754 aa2.69□□□□□ -1.98
HMGN4-202ENST00000477243 FNDC1Q4ZHG4 1894 aaPredicted RBP2.69□□□□□ -1.98
HMGN4-202ENST00000477243 EIF2AK4Q9P2K8 1649 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 RTTNQ86VV8 2226 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.68□□□□□ -1.981e-10■■■□□ 16
HMGN4-202ENST00000477243 PPIAL4EA0A075B759 164 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 A0A0A0MQY5 61 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PPIAL4CA0A0B4J2A2 164 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TRBV11-1A0A0K0K1C0 115 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TMEM200CA6NKL6 621 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 POC1B-GALNT4F8VUJ3 575 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 F8VVB4 439 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 F8VWA3 439 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 FOXE1O00358 373 aaPredicted RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SDHDO14521 159 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 DVL1O14640 695 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ADAM12O43184 909 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SPINT2O43291 252 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 OR1F1O43749 312 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TIMM8AO60220 97 aaPredicted RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 HCN1O60741 890 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 LDB3O75112 727 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 STX11O75558 287 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ATP6AP2O75787 350 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 NDUFA7O95182 113 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 AHSA1O95433 338 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 H6PDO95479 791 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TSPAN12O95859 305 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 EPOP01588 193 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 RAF1P04049 648 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SERPIND1P05546 499 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 NUDT17P0C025 328 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 HSMCR30P0CW71 290 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PPIAL4FP0DN26 164 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PPIAL4GP0DN37 164 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ZNF24P17028 368 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 MAOAP21397 527 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms