RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 OPN5Q6U736 354 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 RTL4Q6ZR62 310 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 GALNT12Q8IXK2 581 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 C16orf52Q8NHV5 167 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 C11orf24Q96F05 449 aaPredicted RBP19.56■□□□□ 0.72
LIME1-204ENST00000476183 APOPT1Q96IL0 206 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 GAL3ST4Q96RP7 486 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 PARD6BQ9BYG5 372 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 SHCBP1LQ9BZQ2 653 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.56■□□□□ 0.72
LIME1-204ENST00000476183 ZNF407Q9C0G0 2248 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 PCDH7O60245 1069 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 SLC19A2O60779 497 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 ERAL1O75616 437 aaKnown RBP19.55■□□□□ 0.72
LIME1-204ENST00000476183 PORP16435 677 aaPredicted RBP19.55■□□□□ 0.72
LIME1-204ENST00000476183 S1PR1P21453 382 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 SOX18P35713 384 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 FEN1P39748 380 aaKnown RBP19.55■□□□□ 0.72
LIME1-204ENST00000476183 CA7P43166 264 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 NAA20P61599 178 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 BTKQ06187 659 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 RBPJQ06330 500 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 IFFO1Q0D2I5 559 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 MGAT2Q10469 447 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 ZNF791Q3KP31 576 aaPredicted RBP19.55■□□□□ 0.72
LIME1-204ENST00000476183 SLC29A4Q7RTT9 530 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 ZNF615Q8N8J6 731 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 ZNF441Q8N8Z8 693 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 GATA5Q9BWX5 397 aaPredicted RBP19.55■□□□□ 0.72
LIME1-204ENST00000476183 ROPN1BQ9BZX4 212 aaPredicted RBP19.55■□□□□ 0.72
LIME1-204ENST00000476183 ROPN1Q9HAT0 212 aaPredicted RBP19.55■□□□□ 0.72
LIME1-204ENST00000476183 UNC79Q9P2D8 2635 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 SH3BGRL2Q9UJC5 107 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 DLGAP4Q9Y2H0 992 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 ZNF835Q9Y2P0 537 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 CENPEQ02224 2701 aa19.55■□□□□ 0.72
LIME1-204ENST00000476183 CCDC151A5D8V7 595 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 OR6C76A6NM76 312 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 HS6ST1O60243 411 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 ZG16O60844 167 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 IL3P08700 152 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 CCL3P10147 92 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 NT5EP21589 574 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 TIA1P31483 386 aaKnown RBP eCLIP19.54■□□□□ 0.72
LIME1-204ENST00000476183 ALDH9A1P49189 494 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 NR0B1P51843 470 aaKnown RBP19.54■□□□□ 0.72
LIME1-204ENST00000476183 ACSM2AQ08AH3 577 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 C3AR1Q16581 482 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 SPIN4Q56A73 249 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 ACSM2BQ68CK6 577 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 FGD2Q7Z6J4 655 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 SRRM1Q8IYB3 904 aaKnown RBP19.54■□□□□ 0.72
LIME1-204ENST00000476183 GOLM1Q8NBJ4 401 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 OR2M7Q8NG81 312 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 SLC22A8Q8TCC7 542 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 KLHL29Q96CT2 875 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 CNRIP1Q96F85 164 aaPredicted RBP19.54■□□□□ 0.72
LIME1-204ENST00000476183 SGCZQ96LD1 299 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 ZNF681Q96N22 645 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 FAIM2Q9BWQ8 316 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 EBPLQ9BY08 206 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 SH2D2AQ9NP31 389 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 SLC17A7Q9P2U7 560 aa19.54■□□□□ 0.72
LIME1-204ENST00000476183 TFECO14948 347 aaPredicted RBP19.53■□□□□ 0.72
LIME1-204ENST00000476183 SPAG7O75391 227 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 CREB1P16220 341 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 DEKP35659 375 aaKnown RBP19.53■□□□□ 0.72
LIME1-204ENST00000476183 PER3P56645 1201 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 DUSP8Q13202 625 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.53■□□□□ 0.72
LIME1-204ENST00000476183 PRICKLE4Q2TBC4 344 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 CMPK2Q5EBM0 449 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 GALNT18Q6P9A2 607 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 FAM111BQ6SJ93 734 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 Q6ZPB1 254 aaPredicted RBP19.53■□□□□ 0.72
LIME1-204ENST00000476183 SPPL2CQ8IUH8 684 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 GHDCQ8N2G8 530 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 MREGQ8N565 214 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 SLC15A4Q8N697 577 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 OR52N2Q8NGI0 321 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 C16orf78Q8WTQ4 265 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 SPACA9Q96E40 222 aaPredicted RBP19.53■□□□□ 0.72
LIME1-204ENST00000476183 MAGED4Q96JG8 741 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 FAM111AQ96PZ2 611 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 OR10A5Q9H207 317 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 SIRT5Q9NXA8 310 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 MAT2BQ9NZL9 334 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 MID2Q9UJV3 735 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 TINAGQ9UJW2 476 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 DNAJC13O75165 2243 aa19.53■□□□□ 0.72
LIME1-204ENST00000476183 C2orf92A0A1B0GVN3 265 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 GNG14A0A1W2PPG7 69 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 GOLGA6L10A6NI86 522 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 H3BQF6 201 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 TRIM13O60858 407 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 ATP1B1P05026 303 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 FBXO45P0C2W1 286 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 CSNK2A2P19784 350 aaPredicted RBP19.52■□□□□ 0.72
LIME1-204ENST00000476183 CNR1P21554 472 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 CLEC6AQ6EIG7 209 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms