RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 CT62P0C5K7 136 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 NCF2P19878 526 aaPredicted RBP20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 SOX18P35713 384 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 KIR3DL1P43629 444 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 ZFP36L2P47974 494 aaKnown RBP20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 PGDP52209 483 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 NCBP2P52298 156 aaKnown RBP eCLIP20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 WNT3P56703 355 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 PGS1Q32NB8 556 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 FAM174BQ3ZCQ3 159 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 ZNF628Q5EBL2 1059 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 SPANXN4Q5MJ08 99 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 PAOXQ6QHF9 649 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 CLEC1AQ8NC01 280 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 APCDD1LQ8NCL9 501 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 ADCY4Q8NFM4 1077 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 OR9A2Q8NGT5 310 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 M1APQ8TC57 530 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 SLC2A12Q8TD20 617 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 DOK4Q8TEW6 326 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 CTHRC1Q96CG8 243 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 ZBED6CLQ96FA7 236 aaPredicted RBP20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 ZBTB18Q99592 522 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 RABEP2Q9H5N1 569 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 MMP25Q9NPA2 562 aa20.67■□□□□ 0.9
MCF2L2-209ENST00000475664 DYRK3O43781 588 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 IGKV3-11P04433 115 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 SERPINA7P05543 415 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 ICAM2P13598 275 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 EFNA1P20827 205 aaPredicted RBP20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 SOX8P57073 446 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 PHC1P78364 1004 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 MAP4K2Q12851 820 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 ZNF267Q14586 743 aaPredicted RBP20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 MLC1Q15049 377 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 OR4F3Q6IEY1 312 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 FAM111BQ6SJ93 734 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 PIGWQ7Z7B1 504 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 KBTBD2Q8IY47 623 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 ZNF321PQ8N8H1 164 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 OR1N1Q8NGS0 311 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 ZFP28Q8NHY6 868 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 ELP5Q8TE02 316 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 ZNF721Q8TF20 911 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 NCLNQ969V3 563 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 VMP1Q96GC9 406 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 SENP5Q96HI0 755 aaPredicted RBP20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 ART5Q96L15 291 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 CNPPD1Q9BV87 410 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 SEMA4CQ9C0C4 833 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 OR8D2Q9GZM6 311 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 TMEM45AQ9NWC5 275 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 ZNF223Q9UK11 482 aaPredicted RBP20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 ERVK-19Q9WJR5 959 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 PKD1L2Q7Z442 2459 aa20.66■□□□□ 0.9
MCF2L2-209ENST00000475664 S1PR1P21453 382 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 S100A3P33764 101 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 FUT7Q11130 342 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 TBR1Q16650 682 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 C6orf163Q5TEZ5 329 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 C19orf48Q6RUI8 117 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 ZNF551Q7Z340 670 aaPredicted RBP20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 GPR155Q7Z3F1 870 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 FUNDC1Q8IVP5 155 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 VWA5B2Q8N398 1253 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 CPSF7Q8N684 471 aaKnown RBP20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 APOBEC4Q8WW27 367 aaKnown RBP20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 NUDT9Q9BW91 350 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 ZNF639Q9UID6 485 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 LOC400499M0QZD8 3231 aa20.65■□□□□ 0.9
MCF2L2-209ENST00000475664 A0A1W2PRB8 838 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 FAM234BA2RU67 622 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 SCN2BO60939 215 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 DNAJB5O75953 348 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 SLITRK5O94991 958 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 CLPSP04118 112 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 ITGB2P05107 769 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 PGRP06401 933 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 ITGAMP11215 1152 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 POLR2JP52435 117 aaKnown RBP20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 DGKQP52824 942 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 MANFP55145 182 aaKnown RBP20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 AP2B1P63010 937 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 MRPS35P82673 323 aaKnown RBP20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 COL28A1Q2UY09 1125 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 BORAQ6PGQ7 559 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 GALNT16Q8N428 558 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 KIF2BQ8N4N8 673 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 OR5P2Q8WZ92 322 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 KAT2AQ92830 837 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 CCT8L2Q96SF2 557 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 SAR1AQ9NR31 198 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 COPS7AQ9UBW8 275 aa20.64■□□□□ 0.89
MCF2L2-209ENST00000475664 PLOD2O00469 737 aa20.63■□□□□ 0.89
MCF2L2-209ENST00000475664 RNASET2O00584 256 aaKnown RBP20.63■□□□□ 0.89
MCF2L2-209ENST00000475664 FAM107AO95990 144 aa20.63■□□□□ 0.89
MCF2L2-209ENST00000475664 IFI6P09912 130 aa20.63■□□□□ 0.89
MCF2L2-209ENST00000475664 SSTR4P31391 388 aa20.63■□□□□ 0.89
MCF2L2-209ENST00000475664 CDK9P50750 372 aaKnown RBP20.63■□□□□ 0.89
MCF2L2-209ENST00000475664 CLCN2P51788 898 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms