RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SLC6A15Q9H2J7 730 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF703Q9H7S9 590 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-207ENST00000475549 CXorf21Q9HAI6 301 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ZFP64Q9NPA5 681 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ACKR4Q9NPB9 350 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 FARSBQ9NSD9 589 aaKnown RBP6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ALKBH4Q9NXW9 302 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 CPSF2Q9P2I0 782 aaKnown RBP6.45□□□□□ -1.38
HDAC3-207ENST00000475549 DMGDHQ9UI17 866 aaKnown RBP6.45□□□□□ -1.38
HDAC3-207ENST00000475549 PHF11Q9UIL8 331 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 CES1P1Q9UKY3 287 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 DTX4Q9Y2E6 619 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ANGPTL3Q9Y5C1 460 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 SPACA6W5XKT8 324 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 F8P00451 2351 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 SETD2Q9BYW2 2564 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-207ENST00000475549 MTORP42345 2549 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 TRGV5A0A0B4J1U4 118 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 IQANK1A0A1B0GTG1 560 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 C2orf92A0A1B0GVN3 265 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 ANKRD33BA6NCL7 494 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 ACSL3O95573 720 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 KLK1P06870 262 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 NR2F6P10588 404 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 TSPAN8P19075 237 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 SERPINB3P29508 390 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 GALNSP34059 522 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 BUD31P41223 144 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-207ENST00000475549 CASP3P42574 277 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 ZFP36L2P47974 494 aaKnown RBP6.44□□□□□ -1.38
HDAC3-207ENST00000475549 TRPC1P48995 793 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 XKP51811 444 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 DUSP2Q05923 314 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 GALNT1Q10472 559 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-207ENST00000475549 UAP1Q16222 522 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-207ENST00000475549 NTRK2Q16620 822 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 FRG2Q64ET8 278 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 FAM180BQ6P0A1 224 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 METTL2BQ6P1Q9 378 aaKnown RBP6.44□□□□□ -1.38
HDAC3-207ENST00000475549 FAM111BQ6SJ93 734 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 CYP20A1Q6UW02 462 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 SPNS3Q6ZMD2 512 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 RNF111Q6ZNA4 994 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 CCDC91Q7Z6B0 441 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 CDH24Q86UP0 819 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 NOA1Q8NC60 698 aaKnown RBP6.44□□□□□ -1.38
HDAC3-207ENST00000475549 FAM13CQ8NE31 585 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 C7orf57Q8NEG2 295 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 OR10Q1Q8NGQ4 319 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 NEIL3Q8TAT5 605 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 SLC22A8Q8TCC7 542 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 DCAKDQ8WVC6 231 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 SLC44A1Q8WWI5 657 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 TM4SF18Q96CE8 201 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 GNRHR2Q96P88 292 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 FRG2BQ96QU4 278 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 TIMP4Q99727 224 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 NTMT1Q9BV86 223 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 ANGPTL4Q9BY76 406 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 UBQLN3Q9H347 655 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 LIME1Q9H400 295 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 LDAHQ9H6V9 325 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 LYARQ9NX58 379 aaKnown RBP6.44□□□□□ -1.38
HDAC3-207ENST00000475549 CNIH4Q9P003 139 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 XPR1Q9UBH6 696 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 PCTPQ9UKL6 214 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 L3MBTL1Q9Y468 752 aa6.44□□□□□ -1.38
HDAC3-207ENST00000475549 TNPO3Q9Y5L0 923 aaKnown RBP6.44□□□□□ -1.38
HDAC3-207ENST00000475549 MAP1AP78559 2803 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-207ENST00000475549 SPG11Q96JI7 2443 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 OR6C76A6NM76 312 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 FIGNL2A6NMB9 653 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 B4DXG7 233 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 STX16-NPEPL1H3BU86 382 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 SYT5O00445 386 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 STX16O14662 325 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 OR10H2O60403 315 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 WDR1O75083 606 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 NME6O75414 186 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 SEMA3DO95025 777 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 HPNP05981 417 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 ABCB1P08183 1280 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 RPS17P08708 135 aaKnown RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 RBP1P09455 135 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 NUDT7P0C024 238 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 CTAGE8P0CG41 777 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 CPMP14384 443 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 GCAP28676 217 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 PTGDSP41222 190 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 SERPINB8P50452 374 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 CDH13P55290 713 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 KCNJ2P63252 427 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 CRYZQ08257 329 aaKnown RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 TBL3Q12788 808 aaKnown RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 PRICKLE4Q2TBC4 344 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 TRMT12Q53H54 448 aaKnown RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 SGO1Q5FBB7 561 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 TCHHL1Q5QJ38 904 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-207ENST00000475549 CCNYL2Q5T2Q4 361 aa6.43□□□□□ -1.38
HDAC3-207ENST00000475549 C1orf185Q5T7R7 199 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms