RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CTBP2P56545 445 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 RAB7BQ96AH8 199 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 MOAP1Q96BY2 351 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 C14orf119Q9NWQ9 140 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 ZNF850A8MQ14 1090 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 VEGFDO43915 354 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 FOXD2O60548 495 aaPredicted RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 LEPRP48357 1165 aaKnown RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 LBX1P52954 281 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 ALG10BQ5I7T1 473 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 GLT8D1Q68CQ7 371 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 ZNF584Q8IVC4 421 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 STOML3Q8TAV4 291 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 ELP5Q8TE02 316 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 BOCQ9BWV1 1114 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 MKLN1Q9UL63 735 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 SPEF1Q9Y4P9 236 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 DNMT3AQ9Y6K1 912 aaPredicted RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 MEIS3P2A8K0S8 358 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 LRRN3E7EW58 273 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 ANHXE9PGG2 379 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 RAD51DO75771 328 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 S1PR4O95977 384 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 RBM39Q14498 530 aaKnown RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 TP53INP2Q8IXH6 220 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 RFT1Q96AA3 541 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 ZNF689Q96CS4 500 aaPredicted RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 C7orf34Q96L11 122 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 PIP5K1AQ99755 562 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 HDHD5Q9BXW7 423 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 LRRN3Q9H3W5 708 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 A0A1B0GV50 99 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 KLF11O14901 512 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 HTRA3P83110 453 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 SHC2P98077 582 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 HHEXQ03014 270 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 LRIF1Q5T3J3 769 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 ZC3H14Q6PJT7 736 aaKnown RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 NXPE4Q6UWF7 544 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 CREB3L4Q8TEY5 395 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 A0A1W2PPW3 197 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 CD70P32970 193 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 GCGRP47871 477 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 LRRC15Q8TF66 581 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 DIO2Q92813 273 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 CIDECQ96AQ7 238 aaPredicted RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 RXFP3Q9NSD7 469 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 GPR52Q9Y2T5 361 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 A6NL46 340 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 HK3P52790 923 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 RPS15AP62244 130 aaKnown RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 USF2Q15853 346 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 ZNF783Q6ZMS7 281 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 CLECL1Q8IZS7 167 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 KCNK13Q9HB14 408 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 DZANK1Q9NVP4 752 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 RBBP9O75884 186 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 SLITRK5O94991 958 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 HOXD8P13378 290 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 DNAJB1P25685 340 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 ZNF81P51508 661 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 ARSDP51689 593 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 SIM1P81133 766 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 RTP2Q5QGT7 225 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 PLEKHG7Q6ZR37 379 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 SHISA6Q6ZSJ9 500 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 ZFAND4Q86XD8 727 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 ADAMTS10Q9H324 1103 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 POPDC3Q9HBV1 291 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 PCDHB16Q9NRJ7 776 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 MAN2C1Q9NTJ4 1040 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 SHROOM3Q8TF72 1996 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 A0A0G2JPF8 293 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 HNRNPCL3B7ZW38 293 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 DLGAP1O14490 977 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 STSP08842 583 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 CD3GP09693 182 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 HNRNPCL4P0DMR1 293 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 BPIP17213 487 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 AMY2BP19961 511 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 FECHP22830 423 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 SPINT3P49223 89 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 FAM189BP81408 668 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 MTFR2Q6P444 385 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 KCTD18Q6PI47 426 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 BBS10Q8TAM1 723 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 FAM210AQ96ND0 272 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 NKX2-4Q9H2Z4 354 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 OR51B6Q9H340 312 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 OR2S2Q9NQN1 319 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 CXXC1Q9P0U4 656 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 ICKQ9UPZ9 632 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 CDK5RAP2Q96SN8 1893 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 ATE1O95260 518 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 ANXA3P12429 323 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 RNH1P13489 461 aaKnown RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 RORAP35398 523 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 RUNX3Q13761 415 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 CCDC58Q4VC31 144 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 ENPP6Q6UWR7 440 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms