RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 TEX10Q9NXF1 929 aaPredicted RBP7.2□□□□□ -1.26
USP54-211ENST00000474929 WWOXQ9NZC7 414 aa7.2□□□□□ -1.26
USP54-211ENST00000474929 MGAT4BQ9UQ53 548 aa7.2□□□□□ -1.26
USP54-211ENST00000474929 IGHV4-61A0A0C4DH41 118 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 LGALS16A8MUM7 142 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 BTNL10A8MVZ5 291 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 TIMM23O14925 209 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 B3GALT2O43825 422 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 LCMT2O60294 686 aaKnown RBP7.19□□□□□ -1.26
USP54-211ENST00000474929 CTNSO60931 367 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 PLGP00747 810 aaPredicted RBP7.19□□□□□ -1.26
USP54-211ENST00000474929 PEPDP12955 493 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 EPHA1P21709 976 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 IL32P24001 234 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 APEX1P27695 318 aaKnown RBP7.19□□□□□ -1.26
USP54-211ENST00000474929 IMPA1P29218 277 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 SKIV2L2P42285 1042 aaKnown RBP7.19□□□□□ -1.26
USP54-211ENST00000474929 CDH15P55291 814 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 CTBP2P56545 445 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 CLDN18P56856 261 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 RAB8AP61006 207 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 RPS3AP61247 264 aaKnown RBP7.19□□□□□ -1.26
USP54-211ENST00000474929 ZNF844Q08AG5 666 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 GPS1Q13098 491 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 SNTA1Q13424 505 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 GUSBP1Q15486 140 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 FNDC7Q5VTL7 733 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 LCTLQ6UWM7 567 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 KIAA1328Q86T90 577 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 TBC1D1Q86TI0 1168 aaPredicted RBP7.19□□□□□ -1.26
USP54-211ENST00000474929 C9orf40Q8IXQ3 194 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 LRRC56Q8IYG6 542 aaPredicted RBP7.19□□□□□ -1.26
USP54-211ENST00000474929 ABHD11Q8NFV4 315 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 ZNF721Q8TF20 911 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 SREK1Q8WXA9 508 aaKnown RBP7.19□□□□□ -1.26
USP54-211ENST00000474929 NEUROG1Q92886 237 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 UBE2FQ969M7 185 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 GAL3ST4Q96RP7 486 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 DHRS9Q9BPW9 319 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 TRMOQ9BU70 441 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 ALOXE3Q9BYJ1 711 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 P2RY12Q9H244 342 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 METTL7AQ9H8H3 244 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 GLRX2Q9NS18 164 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 CATSPERZQ9NTU4 200 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 LIMA1Q9UHB6 759 aaKnown RBP7.19□□□□□ -1.26
USP54-211ENST00000474929 ING1Q9UK53 422 aaPredicted RBP7.19□□□□□ -1.26
USP54-211ENST00000474929 CLDN16Q9Y5I7 305 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP54-211ENST00000474929 SPACA6W5XKT8 324 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 ALPK2Q86TB3 2170 aa7.19□□□□□ -1.26
USP54-211ENST00000474929 LRRC53A6NM62 1247 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 B4DSR2 109 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 GNB5O14775 395 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 CST8O60676 142 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 LRATO95237 230 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 BCL10O95999 233 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 SERPINA6P08185 405 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 VSIG8P0DPA2 414 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 CDH1P12830 882 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 ENO3P13929 434 aaPredicted RBP7.18□□□□□ -1.26
USP54-211ENST00000474929 PECAM1P16284 738 aaPredicted RBP7.18□□□□□ -1.26
USP54-211ENST00000474929 KRT15P19012 456 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 IL11P20809 199 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 GSTM2P28161 218 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 SRD5A2P31213 254 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 CASP3P42574 277 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 NPY2RP49146 381 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 UBA52P62987 128 aaKnown RBP7.18□□□□□ -1.26
USP54-211ENST00000474929 PLIN5Q00G26 463 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 UBXN1Q04323 297 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 SETDB1Q15047 1291 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 KLHL38Q2WGJ6 581 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 ALKBH2Q6NS38 261 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 SLC30A6Q6NXT4 461 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 ANGPTL8Q6UXH0 198 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 LINC00523Q86TU6 105 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 CCDC25Q86WR0 208 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 CDKL3Q8IVW4 592 aaPredicted RBP7.18□□□□□ -1.26
USP54-211ENST00000474929 KLHDC8BQ8IXV7 354 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 RCOR2Q8IZ40 523 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 FAM47BQ8NA70 645 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 SYT14Q8NB59 555 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 OR13J1Q8NGT2 312 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 FBF1Q8TES7 1133 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 S100PBPQ96BU1 408 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 FBXL20Q96IG2 436 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 GMPPAQ96IJ6 420 aaPredicted RBP7.18□□□□□ -1.26
USP54-211ENST00000474929 PELOQ9BRX2 385 aaKnown RBP7.18□□□□□ -1.26
USP54-211ENST00000474929 OSBPL11Q9BXB4 747 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 WWTR1Q9GZV5 400 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 TAS2R10Q9NYW0 307 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 CTTNBP2NLQ9P2B4 639 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 POU2F3Q9UKI9 436 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 NENFQ9UMX5 172 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 DTX4Q9Y2E6 619 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 R3HDM2Q9Y2K5 976 aaKnown RBP7.18□□□□□ -1.26
USP54-211ENST00000474929 MRPS18CQ9Y3D5 142 aaKnown RBP7.18□□□□□ -1.26
USP54-211ENST00000474929 SPEF1Q9Y4P9 236 aa7.18□□□□□ -1.26
USP54-211ENST00000474929 PCDHB14Q9Y5E9 798 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms