RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 WNT11O96014 354 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ADH1BP00325 375 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 THBS1P07996 1170 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 SYPP08247 313 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 OTX1P32242 354 aaPredicted RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 CA5AP35218 305 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 XKP51811 444 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 UGT2B15P54855 530 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 KCNQ4P56696 695 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 DNAJB13P59910 316 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 P2RY14Q15391 338 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 SBK1Q52WX2 424 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 CERCAMQ5T4B2 595 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 DCAF15Q66K64 600 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 OR8G2PQ6IF36 304 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 UNQ9370/PRO34162Q6UXP9 181 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 UNQ6494/PRO21346Q6UXR6 183 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 Q6ZNB5 142 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 LRRC75A-AS1Q8N1F1 130 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ZNF383Q8NA42 475 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 KYQ8NBH2 561 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PHOSPHO1Q8TCT1 267 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 HMGB4Q8WW32 186 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 SMPDL3BQ92485 455 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ULK4Q96C45 1275 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 LRCH3Q96II8 777 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 RNF170Q96K19 258 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 MED10Q9BTT4 135 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ELOVL1Q9BW60 279 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 MND1Q9BWT6 205 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 UCK2Q9BZX2 261 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 GPR88Q9GZN0 384 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 KIR3DX1Q9H7L2 352 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PAK6Q9NQU5 681 aaPredicted RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 CYSLTR2Q9NS75 346 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 XPR1Q9UBH6 696 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ZDHHC2Q9UIJ5 367 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 RPL26L1Q9UNX3 145 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 PPP1R3CQ9UQK1 317 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 VPS8Q8N3P4 1428 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 MAST3O60307 1309 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 KCNE1BA0A087WTH5 132 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 FAM237BA0A1B0GVD1 139 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 A0A1W2PQ45 241 aaPredicted RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 A0A1W2PQY0 241 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 MYO1GB0I1T2 1018 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 DNPH1O43598 174 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 RAMP3O60896 148 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ZNF780AO75290 641 aaPredicted RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 OR2J2O76002 312 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 LRIG2O94898 1065 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 TPSB2P20231 275 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 IL1R2P27930 398 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 BSGP35613 385 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 GMPSP49915 693 aaPredicted RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 BLKP51451 505 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 SNU13P55769 128 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 MAZP56270 477 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 CDR2Q01850 454 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PDIA2Q13087 525 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 FZD5Q13467 585 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 FASTKQ14296 549 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 HNF4GQ14541 408 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 RBMS2Q15434 407 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 TPSAB1Q15661 275 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 DLG2Q15700 870 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PSG3Q16557 428 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PROX2Q3B8N5 592 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 C5orf47Q569G3 176 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 TMEM41BQ5BJD5 291 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 LRRC73Q5JTD7 316 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 RNF43Q68DV7 783 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 SCARA3Q6AZY7 606 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 DPY19L2P2Q6ZN68 376 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ARCQ7LC44 396 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ISCA2Q86U28 154 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 RHOT1Q8IXI2 618 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ZNF100Q8IYN0 542 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 GTPBP8Q8N3Z3 284 aaPredicted RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 FBXO39Q8N4B4 442 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 DHRSXQ8N5I4 330 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 TC2NQ8N9U0 490 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 OR1M1Q8NGA1 313 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 SEMA4DQ92854 862 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ST6GALNAC6Q969X2 333 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ESAMQ96AP7 390 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 C1orf159Q96HA4 380 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 TCEAL7Q9BRU2 100 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 TRMT61BQ9BVS5 477 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 IL22Q9GZX6 179 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 MTG2Q9H4K7 406 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PRDM12Q9H4Q4 367 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PPP1R3EQ9H7J1 279 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 WFDC1Q9HC57 220 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 KRCC1Q9NPI7 259 aaPredicted RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 TM7SF3Q9NS93 570 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 CD84Q9UIB8 345 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ZFP69BQ9UJL9 534 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 BTBD3Q9Y2F9 522 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PTPRUQ92729 1446 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms