RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 B2RBV5 119 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 C17orf105B2RV13 164 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 SCN2BO60939 215 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 ERN1O75460 977 aaKnown RBP7.8□□□□□ -1.16
CNN3-205ENST00000474409 SLITRK5O94991 958 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 UNC5CO95185 931 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 RECKO95980 971 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 IGHEP01854 428 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 ATP1B1P05026 303 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 KRT16P08779 473 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 PTPN4P29074 926 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 OTX2P32243 289 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 CDKN2CP42773 168 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 TRPC1P48995 793 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 RASSF2P50749 326 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 PGDP52209 483 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 EFNA3P52797 238 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 OR4D2P58180 307 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 MRPS35P82673 323 aaKnown RBP7.8□□□□□ -1.16
CNN3-205ENST00000474409 PRR5P85299 388 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 BNIP1Q12981 228 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 GAB1Q13480 694 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 TP53BP2Q13625 1128 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 CAPRIN1Q14444 709 aaKnown RBP7.8□□□□□ -1.16
CNN3-205ENST00000474409 ELAVL1Q15717 326 aaKnown RBP7.8□□□□□ -1.16
CNN3-205ENST00000474409 SFT2D3Q587I9 215 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 ZNF628Q5EBL2 1059 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 FAM69BQ5VUD6 431 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 HACD2Q6Y1H2 254 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 TMEM64Q6YI46 380 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 ZNF621Q6ZSS3 439 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 ARPINQ7Z6K5 226 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 RAB43Q86YS6 212 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 VWA5B2Q8N398 1253 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 DPP10Q8N608 796 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 PLPP5Q8NEB5 264 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 OR56A1Q8NGH5 318 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 OR14A16Q8NHC5 309 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 SFXN5Q8TD22 340 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 ZNF675Q8TD23 568 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 GTF2H4Q92759 462 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 KAT2AQ92830 837 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 RIT1Q92963 219 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 NKD1Q969G9 470 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 PPWD1Q96BP3 646 aaKnown RBP7.8□□□□□ -1.16
CNN3-205ENST00000474409 MOAP1Q96BY2 351 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 MAGED4Q96JG8 741 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 SLC35G5Q96KT7 338 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 ART5Q96L15 291 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 MS4A4EQ96PG1 132 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 SLC39A3Q9BRY0 314 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 SLC35A5Q9BS91 424 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 GPR87Q9BY21 358 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 SPRY4Q9C004 299 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 PAIP1Q9H074 479 aaKnown RBP7.8□□□□□ -1.16
CNN3-205ENST00000474409 C3orf14Q9HBI5 128 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 SERHLQ9NQF3 203 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 ZCCHC3Q9NUD5 404 aaKnown RBP7.8□□□□□ -1.16
CNN3-205ENST00000474409 DDX18Q9NVP1 670 aaKnown RBP7.8□□□□□ -1.16
CNN3-205ENST00000474409 MAT2BQ9NZL9 334 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 KCND3Q9UK17 655 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 FARSAQ9Y285 508 aaKnown RBP7.8□□□□□ -1.16
CNN3-205ENST00000474409 MSRB2Q9Y3D2 182 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 CLCA3PQ9Y6N3 262 aa7.8□□□□□ -1.16
CNN3-205ENST00000474409 KIAA1549Q9HCM3 1950 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 IGHV3-20A0A0C4DH32 117 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 LOC101059948A0A1B0GTJ6 334 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 SAGE2PA6NJ88 616 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 PCDH17O14917 1159 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 EMC8O43402 210 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 COQ9O75208 318 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 KLF7O75840 302 aaPredicted RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 SEC24DO94855 1032 aaPredicted RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 NPPAP01160 153 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 UMODP07911 640 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 ADRB1P08588 477 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 CT62P0C5K7 136 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 T-ENOLP0DO92 83 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 UQCRC2P22695 453 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 PPIBP23284 216 aaKnown RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 GALNSP34059 522 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 PRKAG1P54619 331 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 MTPNP58546 118 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 SLC25A3Q00325 362 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 ZNF155Q12901 538 aaPredicted RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 ZNF267Q14586 743 aaPredicted RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 TGIF1Q15583 401 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 SPRED3Q2MJR0 410 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 PRICKLE4Q2TBC4 344 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 GTDC1Q4AE62 458 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 DNAL1Q4LDG9 190 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 LRIF1Q5T3J3 769 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 CPZQ66K79 652 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 BHLHB9Q6PI77 547 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 PAPD4Q6PIY7 484 aaKnown RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 FAM111BQ6SJ93 734 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 ZNF771Q7L3S4 317 aaPredicted RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 CPEB2Q7Z5Q1 589 aaKnown RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 ANKRD37Q7Z713 158 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 VASH2Q86V25 355 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms