RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ACTRT1Q8TDG2 376 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SCFD2Q8WU76 684 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SMAP2Q8WU79 429 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CTNNBL1Q8WYA6 563 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SEPT1Q8WYJ6 367 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ARHGEF2Q92974 986 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SKA1Q96BD8 255 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PHYHIPLQ96FC7 376 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 IFT74Q96LB3 600 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SGK494Q96LW2 274 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ZMAT2Q96NC0 199 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ALS2CR12Q96Q35 445 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PEBP4Q96S96 227 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 BARD1Q99728 777 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 MRPL45Q9BRJ2 306 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 C11orf70Q9BRQ4 267 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CHCHD6Q9BRQ6 235 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 NUP85Q9BW27 656 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 AP1M1Q9BXS5 423 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 NFKBIZQ9BYH8 718 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TXLNGYQ9BZA5 131 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ELOVL4Q9GZR5 314 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 MAF1Q9H063 256 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 C2orf40Q9H1Z8 148 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CARD9Q9H257 536 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 MUC13Q9H3R2 512 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 FZD8Q9H461 694 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 DPEP3Q9H4B8 488 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 NXF3Q9H4D5 531 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SMARCAD1Q9H4L7 1026 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 GPN1Q9HCN4 374 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 GDF3Q9NR23 364 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 KRT84Q9NSB2 600 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CISHQ9NSE2 258 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SEPT11Q9NVA2 429 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 RAB20Q9NX57 234 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 GTSE1Q9NYZ3 720 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SUCLA2Q9P2R7 463 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CACNG4Q9UBN1 327 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 AMACRQ9UHK6 382 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 FAM153AQ9UHL3 310 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ANAPC7Q9UJX3 599 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 HPCAL4Q9UM19 191 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 EXOC7Q9UPT5 735 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 HES2Q9Y543 173 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SPIN1Q9Y657 262 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PCDH15Q96QU1 1955 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF292O60281 2723 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ZFHX3Q15911 3703 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 FRYQ5TBA9 3013 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 DCHS1Q96JQ0 3298 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 FAM186AA6NE01 2351 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SPTBN2O15020 2390 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CPAMD8Q8IZJ3 1885 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CEP295Q9C0D2 2601 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 UNC13CQ8NB66 2214 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 THADAQ6YHU6 1953 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 EXPH5Q8NEV8 1989 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 ANK3Q12955 4377 aaKnown RBP1.32□□□□□ -2.2
CCDC39-203ENST00000473854 SCN3AQ9NY46 2000 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 TNRC6BQ9UPQ9 1833 aaKnown RBP1.32□□□□□ -2.2
CCDC39-203ENST00000473854 hCG_1818297A0A087WSY0 165 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 MBLAC1A4D2B0 266 aaPredicted RBP1.32□□□□□ -2.2
CCDC39-203ENST00000473854 SLC15A5A6NIM6 579 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 LIPT2A6NK58 231 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 SHISA9B4DS77 424 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 E9PI62 339 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 F5H0A9 414 aaPredicted RBP1.32□□□□□ -2.2
CCDC39-203ENST00000473854 H0YCG3 227 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 K7ERI5 159 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 M0QYV0 167 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 PTGESO14684 152 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 OGG1O15527 345 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 CLDN3O15551 220 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 ATP8B1O43520 1251 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 PSTPIP1O43586 416 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 DOK2O60496 412 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 LRCH4O75427 683 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 GPC4O75487 556 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 PROSCO94903 275 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 CCNDBP1O95273 360 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 OR2C1O95371 312 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 PGK1P00558 417 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 C9P02748 559 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 SHBGP04278 402 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 ALOX5P09917 674 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 MCF2P10911 925 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 RALAP11233 206 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 GZMAP12544 262 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 LAMP2P13473 410 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 CCDC130P13994 396 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 DARSP14868 501 aaKnown RBP1.32□□□□□ -2.2
CCDC39-203ENST00000473854 ETS1P14921 441 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 PRLRP16471 622 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 TNNI1P19237 187 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 CYP2B6P20813 491 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 PSMA4P25789 261 aaKnown RBP1.32□□□□□ -2.2
CCDC39-203ENST00000473854 CCND3P30281 292 aaPredicted RBP1.32□□□□□ -2.2
CCDC39-203ENST00000473854 HSD17B3P37058 310 aa1.32□□□□□ -2.2
CCDC39-203ENST00000473854 HSPA9P38646 679 aaKnown RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms