RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CHMP6Q96FZ7 201 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 SENP5Q96HI0 755 aaPredicted RBP12.19□□□□□ -0.46
TPM3-216ENST00000473036 DGAT2Q96PD7 388 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 CDCP1Q9H5V8 836 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 CXorf21Q9HAI6 301 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 C1orf109Q9NX04 203 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 GNG14A0A1W2PPG7 69 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 GMNCA6NCL1 334 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 TTLL8A6PVC2 850 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 RGS14O43566 566 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 DPM1O60762 260 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 ALPPP05187 535 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 VIMP08670 466 aaKnown RBP12.18□□□□□ -0.46
TPM3-216ENST00000473036 SLC35E2P0CK97 266 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 TROVE2P10155 538 aaKnown RBP eCLIP12.18□□□□□ -0.46
TPM3-216ENST00000473036 CPMP14384 443 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 SDC1P18827 310 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 TNNI3P19429 210 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 ALDH9A1P49189 494 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 RPL14P50914 215 aaKnown RBP12.18□□□□□ -0.46
TPM3-216ENST00000473036 MLF1P58340 268 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 ERVK-8P63133 956 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 NR6A1Q15406 480 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 LTB4RQ15722 352 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 MPEG1Q2M385 716 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 SPRED3Q2MJR0 410 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 RPS19BP1Q86WX3 136 aaKnown RBP12.18□□□□□ -0.46
TPM3-216ENST00000473036 C9orf40Q8IXQ3 194 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 MORN4Q8NDC4 146 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 SUN3Q8TAQ9 357 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 PIWIL2Q8TC59 973 aaKnown RBP12.18□□□□□ -0.46
TPM3-216ENST00000473036 CPT1CQ8TCG5 803 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 HAS2Q92819 552 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 PNPLA2Q96AD5 504 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 VMP1Q96GC9 406 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 PPP1R36Q96LQ0 422 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 SIGLEC12Q96PQ1 595 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 OR8D2Q9GZM6 311 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 SLAMF7Q9NQ25 335 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 ANKRD10Q9NXR5 420 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 STMN3Q9NZ72 180 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 BAIAP2L1Q9UHR4 511 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 ERVK-19Q9WJR5 959 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 NTNG1Q9Y2I2 539 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 CLCA3PQ9Y6N3 262 aa12.18□□□□□ -0.46
TPM3-216ENST00000473036 TEP1Q99973 2627 aaKnown RBP12.17□□□□□ -0.46
TPM3-216ENST00000473036 CRYBG3Q68DQ2 2970 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 TRPC5OSA6NMA1 111 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 TCP11X1B4DZS4 312 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 PEX11AO75192 247 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 NME6O75414 186 aaPredicted RBP12.17□□□□□ -0.46
TPM3-216ENST00000473036 ERAL1O75616 437 aaKnown RBP12.17□□□□□ -0.46
TPM3-216ENST00000473036 BCKDHAP12694 445 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 PIK3R1P27986 724 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 SSTR4P31391 388 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 LSP1P33241 339 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 CD96P40200 585 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 TNFSF10P50591 281 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 CLCN2P51788 898 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 RPL38P63173 70 aaKnown RBP12.17□□□□□ -0.46
TPM3-216ENST00000473036 GNGT1P63211 74 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 OCRLQ01968 901 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 ZNF763Q0D2J5 394 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 C2orf80Q0P641 193 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 TUBA3CQ13748 450 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 ZNF267Q14586 743 aaPredicted RBP12.17□□□□□ -0.46
TPM3-216ENST00000473036 CEBPEQ15744 281 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 PDCD2Q16342 344 aaPredicted RBP12.17□□□□□ -0.46
TPM3-216ENST00000473036 PRICKLE4Q2TBC4 344 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 GALNTL6Q49A17 601 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 ZNF385BQ569K4 471 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 C6orf136Q5SQH8 315 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 ANKRD26P1Q6NSI1 321 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 TUBA3EQ6PEY2 450 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 FAM111BQ6SJ93 734 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 MAVSQ7Z434 540 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 CPLX4Q7Z7G2 160 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 ZNF615Q8N8J6 731 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 ADCY4Q8NFM4 1077 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 CLHC1Q8NHS4 586 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 DAZLQ92904 295 aaKnown RBP12.17□□□□□ -0.46
TPM3-216ENST00000473036 RIT1Q92963 219 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 GFM2Q969S9 779 aaKnown RBP12.17□□□□□ -0.46
TPM3-216ENST00000473036 C19orf60Q96EN9 201 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 RBM18Q96H35 190 aaKnown RBP12.17□□□□□ -0.46
TPM3-216ENST00000473036 FBXL20Q96IG2 436 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 METTL2AQ96IZ6 378 aaKnown RBP12.17□□□□□ -0.46
TPM3-216ENST00000473036 HES7Q9BYE0 225 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 ANKRA2Q9H9E1 313 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 WDR41Q9HAD4 459 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 MYNNQ9NPC7 610 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 MRGBPQ9NV56 204 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 UTS2RQ9UKP6 389 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 B3GNT3Q9Y2A9 372 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 PCDHGA10Q9Y5H3 936 aa12.17□□□□□ -0.46
TPM3-216ENST00000473036 ANKRD17O75179 2603 aaKnown RBP12.16□□□□□ -0.46
TPM3-216ENST00000473036 NUP214P35658 2090 aaPredicted RBP12.16□□□□□ -0.46
TPM3-216ENST00000473036 ZNF195O14628 629 aa12.16□□□□□ -0.46
TPM3-216ENST00000473036 EDF1O60869 148 aaKnown RBP12.16□□□□□ -0.46
TPM3-216ENST00000473036 NEURL1O76050 574 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms