RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 PDE7AQ13946 482 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 PRICKLE4Q2TBC4 344 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 CCDC116Q8IYX3 515 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 TEX19Q8NA77 164 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 OR7G1Q8NGA0 311 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 HAS2Q92819 552 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 ERP27Q96DN0 273 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 CDCP1Q9H5V8 836 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 ZBTB20Q9HC78 741 aaPredicted RBP19.33■□□□□ 0.68
TOP3A-204ENST00000472959 RALYQ9UKM9 306 aaKnown RBP19.33■□□□□ 0.68
TOP3A-204ENST00000472959 ERVK-19Q9WJR5 959 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 USH1CQ9Y6N9 552 aa19.33■□□□□ 0.68
TOP3A-204ENST00000472959 ATRXP46100 2492 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 DYTNA2CJ06 578 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 OR6C76A6NM76 312 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 HRKO00198 91 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 ZNF195O14628 629 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 NTSP30990 170 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 MLF1P58340 268 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 C21orf58P58505 322 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 RNF4P78317 190 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 DUSP2Q05923 314 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 MGAT2Q10469 447 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 KLRB1Q12918 225 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 PTGR1Q14914 329 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 FCRLBQ6BAA4 426 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 FAM180BQ6P0A1 224 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 RNF111Q6ZNA4 994 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 SPATA19Q7Z5L4 167 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 VWA5B2Q8N398 1253 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 ZNF321PQ8N8H1 164 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 ZNF675Q8TD23 568 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 ACTRT2Q8TDY3 377 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 CTHRC1Q96CG8 243 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 MAELQ96JY0 434 aaKnown RBP19.32■□□□□ 0.68
TOP3A-204ENST00000472959 PRPF18Q99633 342 aaKnown RBP19.32■□□□□ 0.68
TOP3A-204ENST00000472959 NPAS2Q99743 824 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 WDR55Q9H6Y2 383 aaPredicted RBP19.32■□□□□ 0.68
TOP3A-204ENST00000472959 MAT2BQ9NZL9 334 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 SH3BP4Q9P0V3 963 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 ATP6V1HQ9UI12 483 aa19.32■□□□□ 0.68
TOP3A-204ENST00000472959 GABRR3A8MPY1 467 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 FCHO1O14526 889 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 SCAMP2O15127 329 aaKnown RBP19.31■□□□□ 0.68
TOP3A-204ENST00000472959 SLITRK5O94991 958 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 EPHA3P29320 983 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 CLDN8P56748 225 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 SLC37A1P57057 533 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 ARG2P78540 354 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 NFATC3Q12968 1075 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 PRSS53Q2L4Q9 553 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 FAM47EQ6ZV65 393 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 MAVSQ7Z434 540 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 RBMXL3Q8N7X1 1067 aaKnown RBP19.31■□□□□ 0.68
TOP3A-204ENST00000472959 SUN3Q8TAQ9 357 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 NUBPLQ8TB37 319 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 DOK4Q8TEW6 326 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 BRINP2Q9C0B6 783 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 RYDENQ9NUL5 291 aaKnown RBP19.31■□□□□ 0.68
TOP3A-204ENST00000472959 MYOTQ9UBF9 498 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 ZNF639Q9UID6 485 aa19.31■□□□□ 0.68
TOP3A-204ENST00000472959 TLN1Q9Y490 2541 aaKnown RBP19.31■□□□□ 0.68
TOP3A-204ENST00000472959 DOCK10Q96BY6 2186 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 SPTA1P02549 2419 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 GOLGA8QA0A0J9YX86 632 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 GOLGA8OA6NCC3 632 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 GOLGA8NF8WBI6 632 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 PDPK1O15530 556 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 WDPCPO95876 746 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 CT62P0C5K7 136 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 S1PR1P21453 382 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 NCBP2P52298 156 aaKnown RBP eCLIP19.3■□□□□ 0.686e-7■□□□□ 10.1
TOP3A-204ENST00000472959 DIO3P55073 304 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 ZNF628Q5EBL2 1059 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 EPGNQ6UW88 154 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 SLC29A4Q7RTT9 530 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 RIMKLAQ8IXN7 391 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 BEST3Q8N1M1 668 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 NATD1Q8N6N6 113 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 ADCY4Q8NFM4 1077 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 OR9A2Q8NGT5 310 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 CEP70Q8NHQ1 597 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 THAP3Q8WTV1 239 aaPredicted RBP19.3■□□□□ 0.68
TOP3A-204ENST00000472959 AMDHD1Q96NU7 426 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 ATAD3AQ9NVI7 634 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 ANAPC2Q9UJX6 822 aa19.3■□□□□ 0.68
TOP3A-204ENST00000472959 YARS2Q9Y2Z4 477 aaKnown RBP19.3■□□□□ 0.68
TOP3A-204ENST00000472959 OR5H15A6NDH6 313 aa19.29■□□□□ 0.68
TOP3A-204ENST00000472959 TMEM200CA6NKL6 621 aa19.29■□□□□ 0.68
TOP3A-204ENST00000472959 TCP11X1B4DZS4 312 aa19.29■□□□□ 0.68
TOP3A-204ENST00000472959 PRKNO60260 465 aaPredicted RBP19.29■□□□□ 0.68
TOP3A-204ENST00000472959 MAN1A2O60476 641 aa19.29■□□□□ 0.68
TOP3A-204ENST00000472959 DIAPH2O60879 1101 aa19.29■□□□□ 0.68
TOP3A-204ENST00000472959 BCAS2O75934 225 aaPredicted RBP19.29■□□□□ 0.68
TOP3A-204ENST00000472959 CLPSP04118 112 aa19.29■□□□□ 0.68
TOP3A-204ENST00000472959 SSTR4P31391 388 aa19.29■□□□□ 0.68
TOP3A-204ENST00000472959 TRHRP34981 398 aaPredicted RBP19.29■□□□□ 0.68
TOP3A-204ENST00000472959 CD97P48960 835 aa19.29■□□□□ 0.68
TOP3A-204ENST00000472959 TLR1Q15399 786 aa19.29■□□□□ 0.68
TOP3A-204ENST00000472959 LTB4RQ15722 352 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms