RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 TAOK1Q7L7X3 1001 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 MILR1Q7Z6M3 343 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 METTL4Q8N3J2 472 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 ZNF441Q8N8Z8 693 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 OR5M9Q8NGP3 310 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 OR5M3Q8NGP4 307 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 TRPC4APQ8TEL6 797 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 TP53INP1Q96A56 240 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 GAL3ST4Q96RP7 486 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 FMO2Q99518 471 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 C1QTNF3Q9BXJ4 246 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 UCK2Q9BZX2 261 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 ZFP64Q9NPA5 681 aa14.08□□□□□ -0.16
VTI1A-203ENST00000472892 EML6Q6ZMW3 1958 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 TRGV5A0A0B4J1U4 118 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 A0A1B0GTL3 188 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 C2orf92A0A1B0GVN3 265 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 A0A1W2PS29 197 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 ANKRD33BA6NCL7 494 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 FIGNL2A6NMB9 653 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 TRIM49D1C9J1S8 452 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 POC1B-GALNT4F8VUJ3 575 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 RPS17P08708 135 aaKnown RBP14.07□□□□□ -0.16
VTI1A-203ENST00000472892 RFPL3SP0C7P2 107 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 PIK3R1P27986 724 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 MAN2A2P49641 1150 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 KCNJ2P63252 427 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 FUT7Q11130 342 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 IFT88Q13099 833 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 NTRK2Q16620 822 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 TTC19Q6DKK2 380 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-203ENST00000472892 RTL6Q6ICC9 239 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 ZNF585AQ6P3V2 769 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 PAGE2Q7Z2X7 111 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 CCDC71Q8IV32 467 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-203ENST00000472892 TAGAPQ8N103 731 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 LRRC25Q8N386 305 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-203ENST00000472892 ZNF615Q8N8J6 731 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 FAM13CQ8NE31 585 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 MNS1Q8NEH6 495 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 MYRIPQ8NFW9 859 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 OR4F6Q8NGB9 312 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 OR10G3Q8NGC4 313 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 OR4K14Q8NGD5 310 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 SARAFQ96BY9 339 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 TTYH2Q9BSA4 534 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 MRPL1Q9BYD6 325 aaKnown RBP14.07□□□□□ -0.16
VTI1A-203ENST00000472892 MRPL46Q9H2W6 279 aaKnown RBP14.07□□□□□ -0.16
VTI1A-203ENST00000472892 LDAHQ9H6V9 325 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 ACKR4Q9NPB9 350 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 KCNJ16Q9NPI9 418 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 NPDC1Q9NQX5 325 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-203ENST00000472892 TEX10Q9NXF1 929 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-203ENST00000472892 TNFRSF10DQ9UBN6 386 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 ACAD8Q9UKU7 415 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 CNOT11Q9UKZ1 510 aaKnown RBP14.07□□□□□ -0.16
VTI1A-203ENST00000472892 BOKQ9UMX3 212 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-203ENST00000472892 FAM215AQ9Y5M1 114 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 TACC2O95359 2948 aa14.07□□□□□ -0.16
VTI1A-203ENST00000472892 A0A087WUV0 522 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-203ENST00000472892 NKX2-6A6NCS4 301 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 LRRC3CA6NJW4 275 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 PPP6CO00743 305 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 WDR1O75083 606 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 OTCP00480 354 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 CT62P0C5K7 136 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 GLI4P10075 376 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 CAPN3P20807 821 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 SSTR4P31391 388 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 XKP51811 444 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 KRTAP10-9P60411 292 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 SGO1Q5FBB7 561 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 CCNYL2Q5T2Q4 361 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 PRAMEF20Q5VT98 475 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 GALNT12Q8IXK2 581 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 ZNF483Q8TF39 744 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-203ENST00000472892 CHTF18Q8WVB6 975 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 ZNF592Q92610 1267 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 OR10A5Q9H207 317 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 ELOVL6Q9H5J4 265 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 ZNF703Q9H7S9 590 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-203ENST00000472892 MCCC2Q9HCC0 563 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 QPCTLQ9NXS2 382 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 CES1P1Q9UKY3 287 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 DNAJC13O75165 2243 aa14.06□□□□□ -0.16
VTI1A-203ENST00000472892 FAM90A27PA6NNH2 459 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 CAPN14A8MX76 684 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 GUCY1B2O75343 617 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 TRIM3O75382 744 aaPredicted RBP14.05□□□□□ -0.16
VTI1A-203ENST00000472892 PDYNP01213 254 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 SNRPAP09012 282 aaKnown RBP14.05□□□□□ -0.16
VTI1A-203ENST00000472892 HOXD4P09016 255 aaPredicted RBP14.05□□□□□ -0.16
VTI1A-203ENST00000472892 CTAGE8P0CG41 777 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 CPMP14384 443 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 POU3F2P20265 443 aaPredicted RBP14.05□□□□□ -0.16
VTI1A-203ENST00000472892 ENDOUP21128 410 aaKnown RBP14.05□□□□□ -0.16
VTI1A-203ENST00000472892 S1PR1P21453 382 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 MSX1P28360 303 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 CDH13P55290 713 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 TLE4Q04727 773 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms