RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 TNFAIP8L3Q5GJ75 292 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 C6orf163Q5TEZ5 329 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 FAM111BQ6SJ93 734 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 OPN5Q6U736 354 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 GFRALQ6UXV0 394 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 Q6ZSR9 355 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 ZCCHC23Q6ZST2 131 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 CROCCP2Q86T23 111 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 GALNT12Q8IXK2 581 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 CCDC116Q8IYX3 515 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 CLYBLQ8N0X4 340 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 SLC15A4Q8N697 577 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 ZNF615Q8N8J6 731 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 FAM76AQ8TAV0 307 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 KLHL29Q96CT2 875 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 ZNF681Q96N22 645 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 BRINP2Q9C0B6 783 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 WWTR1Q9GZV5 400 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 CENPHQ9H3R5 247 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 TUBB1Q9H4B7 451 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 EML4Q9HC35 981 aaKnown RBP8.47□□□□□ -1.05
SYN3-211ENST00000472027 UTS2RQ9UKP6 389 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 OSGIN2Q9Y236 505 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 TRAF6Q9Y4K3 522 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 POLR3HQ9Y535 204 aaPredicted RBP8.47□□□□□ -1.05
SYN3-211ENST00000472027 DNAJC15Q9Y5T4 150 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 PTGDR2Q9Y5Y4 395 aa8.47□□□□□ -1.05
SYN3-211ENST00000472027 TLN1Q9Y490 2541 aaKnown RBP8.47□□□□□ -1.05
SYN3-211ENST00000472027 SHANK1Q9Y566 2161 aa8.46□□□□□ -1.05
SYN3-211ENST00000472027 C2orf92A0A1B0GVN3 265 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 WDR91A4D1P6 747 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 NPIPA5E9PKD4 350 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 NPIPB8E9PQR5 432 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 RGS14O43566 566 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 ASNA1O43681 348 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 SEC22BO75396 215 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 ERLIN1O75477 346 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 NADKO95544 446 aaPredicted RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 CHEK2O96017 543 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 ATP1B1P05026 303 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 LINC00032P0C843 101 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 CNR1P21554 472 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 PRPH2P23942 346 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 PTGER1P34995 402 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 SOX18P35713 384 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 SERPINB5P36952 375 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 NR0B1P51843 470 aaKnown RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 GPR85P60893 370 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 ZNF763Q0D2J5 394 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 EBPQ15125 230 aaKnown RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 ZNF791Q3KP31 576 aaPredicted RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 UGT3A2Q3SY77 523 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 TRMT12Q53H54 448 aaKnown RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 KRTCAP3Q53RY4 240 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 RNFT1Q5M7Z0 435 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 BEND6Q5SZJ8 279 aaPredicted RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 KANK2Q63ZY3 851 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 FAM71E1Q6IPT2 247 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 NOXRED1Q6NXP6 359 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 LYPD8Q6UX82 237 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 LRIG3Q6UXM1 1119 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 RTL4Q6ZR62 310 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 RNF165Q6ZSG1 346 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 NUDCD3Q8IVD9 361 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 HOMEZQ8IX15 550 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 LRRC25Q8N386 305 aaPredicted RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 VWA5B2Q8N398 1253 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 POGLUT1Q8NBL1 392 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 PSD4Q8NDX1 1056 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 ADCY4Q8NFM4 1077 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 OR7G1Q8NGA0 311 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 OR6Y1Q8NGX8 325 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 OR2T11Q8NH01 316 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 C16orf52Q8NHV5 167 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.46□□□□□ -1.06
SYN3-211ENST00000472027 SLC22A8Q8TCC7 542 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 ADIPOR1Q96A54 375 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 TP53INP1Q96A56 240 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 EXOSC8Q96B26 276 aaKnown RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 PGM2Q96G03 612 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 METTL2AQ96IZ6 378 aaKnown RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 SGCZQ96LD1 299 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 GPR137Q96N19 417 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 GAL3ST4Q96RP7 486 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 TSPAN10Q9H1Z9 355 aaPredicted RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 SSU72Q9NP77 194 aaKnown RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 KCNK9Q9NPC2 374 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 PFDN4Q9NQP4 134 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 SLC35C2Q9NQQ7 365 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 DEPPQ9NTK1 212 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 MAT2BQ9NZL9 334 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 BCAP29Q9UHQ4 241 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 ZNF639Q9UID6 485 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 ZDHHC2Q9UIJ5 367 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 ERRFI1Q9UJM3 462 aaPredicted RBP8.46□□□□□ -1.06
SYN3-211ENST00000472027 NPIPA1Q9UND3 350 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 SLC5A6Q9Y289 635 aa8.46□□□□□ -1.06
SYN3-211ENST00000472027 PINLYPA6NC86 204 aa8.45□□□□□ -1.06
SYN3-211ENST00000472027 TMEM233B4DJY2 109 aa8.45□□□□□ -1.06
SYN3-211ENST00000472027 TM9SF1O15321 606 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms