RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 DDX49Q9Y6V7 483 aaKnown RBP3.04□□□□□ -1.92
CD46-213ENST00000471987 PFASO15067 1338 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 IGHV3-35A0A0C4DH35 117 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 LINC00854A0A1B0GVQ3 168 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 FRG2CA6NGY1 282 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 FAM86B1E9PN63 330 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 H0YC42 278 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 H7C0S8 307 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 GPAA1O43292 621 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 DUSP11O75319 330 aaKnown RBP3.03□□□□□ -1.92
CD46-213ENST00000471987 PRAMEF12O95522 483 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 GUCA1CO95843 209 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 SLC4A1P02730 911 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 MT-ND3P03897 115 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 FAM86B2P0C5J1 330 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 PDGFRAP16234 1089 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 FERP16591 822 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 ZNF17P17021 662 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 ADRA2CP18825 462 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 OVGP1Q12889 678 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 SLC17A1Q14916 467 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 TGIF1Q15583 401 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 ANKRD55Q3KP44 614 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 ANKDD1AQ495B1 522 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 AP1ARQ63HQ0 302 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 FAM91A1Q658Y4 838 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 KDELC1Q6UW63 502 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 GCNT7Q6ZNI0 430 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 TMEM182Q6ZP80 229 aaPredicted RBP3.03□□□□□ -1.92
CD46-213ENST00000471987 VSIG1Q86XK7 387 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 TBC1D21Q8IYX1 336 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 SUN5Q8TC36 379 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 FRAT1Q92837 279 aaPredicted RBP3.03□□□□□ -1.92
CD46-213ENST00000471987 CUEDC2Q9H467 287 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 HPF1Q9NWY4 346 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 LAMP5Q9UJQ1 280 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 ETV7Q9Y603 341 aa3.03□□□□□ -1.92
CD46-213ENST00000471987 ANKDD1BA6NHY2 528 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 KLHL41O60662 606 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 TBCAO75347 108 aaKnown RBP3.02□□□□□ -1.93
CD46-213ENST00000471987 STAM2O75886 525 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 OR6A2O95222 327 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 STAMBPO95630 424 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 VIMP08670 466 aaKnown RBP3.02□□□□□ -1.93
CD46-213ENST00000471987 TSPY4P0CV99 314 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 TSPY10P0CW01 314 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 GZMAP12544 262 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 ASMTP46597 345 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 TRDNQ13061 729 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 SCARB2Q14108 478 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 SHROOM1Q2M3G4 852 aaPredicted RBP3.02□□□□□ -1.93
CD46-213ENST00000471987 WSCD2Q2TBF2 565 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 NAT8LQ8N9F0 302 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 OR52K2Q8NGK3 314 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 OR1K1Q8NGR3 316 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 KIF18AQ8NI77 898 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 FBXO30Q8TB52 745 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 TCP11Q8WWU5 503 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 CTNNBL1Q8WYA6 563 aaPredicted RBP3.02□□□□□ -1.93
CD46-213ENST00000471987 DHTKD1Q96HY7 919 aaPredicted RBP3.02□□□□□ -1.93
CD46-213ENST00000471987 SPATA17Q96L03 361 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 CCDC114Q96M63 670 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 ERGIC2Q96RQ1 377 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 TTYH2Q9BSA4 534 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 TXLNGYQ9BZA5 131 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 SLC7A5P2Q9GIP4 190 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 NCOR1P1Q9H4R4 102 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 ZNF665Q9H7R5 613 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 IMPAD1Q9NX62 359 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 SH3BGRL2Q9UJC5 107 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 BARX2Q9UMQ3 279 aaPredicted RBP3.02□□□□□ -1.93
CD46-213ENST00000471987 TMED7Q9Y3B3 224 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 KIF3AQ9Y496 699 aa3.02□□□□□ -1.93
CD46-213ENST00000471987 ILVBLA1L0T0 632 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 CCDC69A6NI79 296 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 ZFP92A6NM28 416 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 F8VZ95 297 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 POLR3GO15318 223 aaPredicted RBP3.01□□□□□ -1.93
CD46-213ENST00000471987 P4HA2O15460 535 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 ZBTB14O43829 449 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 SNX4O95219 450 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 TGDSO95455 350 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 GBAP04062 536 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 APOA4P06727 396 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 CALML3P27482 149 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 TMOD1P28289 359 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 TIA1P31483 386 aaKnown RBP eCLIP3.01□□□□□ -1.93
CD46-213ENST00000471987 TNNT3P45378 269 aaPredicted RBP3.01□□□□□ -1.93
CD46-213ENST00000471987 HNRNPA3P51991 378 aaKnown RBP3.01□□□□□ -1.93
CD46-213ENST00000471987 EMC2Q15006 297 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 CCDC152Q4G0S7 254 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 ODF2Q5BJF6 829 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 CAVIN4Q5BKX8 364 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 TTC19Q6DKK2 380 aaPredicted RBP3.01□□□□□ -1.93
CD46-213ENST00000471987 SLC30A6Q6NXT4 461 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 ANGPTL8Q6UXH0 198 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 TIFABQ6ZNK6 161 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 GALNTL5Q7Z4T8 443 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 C4orf19Q8IY42 314 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 ZNF444Q8N0Y2 327 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms