RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 RBBP5Q15291 538 aaKnown RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 MAPKAPK3Q16644 382 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 IMPG1Q17R60 797 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 TCHHL1Q5QJ38 904 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 NIPAL1Q6NVV3 410 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 ACAD11Q709F0 780 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 KIF2BQ8N4N8 673 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 CPSF7Q8N684 471 aaKnown RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 MFSD9Q8NBP5 474 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 OR5T3Q8NGG3 340 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 HUS1BQ8NHY5 278 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 FAM57AQ8TBR7 257 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 ACTRT2Q8TDY3 377 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 TBC1D20Q96BZ9 403 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 SDCCAG3Q96C92 435 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 THOC1Q96FV9 657 aaKnown RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 MAELQ96JY0 434 aaKnown RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 CCDC28BQ9BUN5 200 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 TMEM120AQ9BXJ8 343 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 RBCK1Q9BYM8 510 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 SPNS1Q9H2V7 528 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 ARL2BPQ9Y2Y0 163 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 SETD2Q9BYW2 2564 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 NF1P21359 2839 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 MED13LQ71F56 2210 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 ZNF860A6NHJ4 632 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 ANKDD1BA6NHY2 528 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 SAGE2PA6NJ88 616 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 OR1F1O43749 312 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 CLEC3AO75596 197 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 RSL1D1O76021 490 aaKnown RBP8.44□□□□□ -1.06
SF3A1-206ENST00000471037 PDYNP01213 254 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 LINC00032P0C843 101 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 ALOX12P18054 663 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 PRPH2P23942 346 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 PTGER1P34995 402 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 HLCSP50747 726 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 TFF3Q07654 80 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 PWP1Q13610 501 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 DDX39BQ13838 428 aaKnown RBP8.44□□□□□ -1.06
SF3A1-206ENST00000471037 TERF2Q15554 542 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 SMU1Q2TAY7 513 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 SLC9B1Q4ZJI4 515 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 ATP6AP1LQ52LC2 224 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 SGO1Q5FBB7 561 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 METTL21CQ5VZV1 264 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 SCIMPQ6UWF3 145 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 C3P1Q6ZMU1 363 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 QSOX2Q6ZRP7 698 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 CD163Q86VB7 1156 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 MARVELD2Q8N4S9 558 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 ANKS4BQ8N8V4 417 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 CCDC197Q8NCU1 140 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 ZNF740Q8NDX6 193 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 TRPV3Q8NET8 790 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 CEP70Q8NHQ1 597 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 C16orf52Q8NHV5 167 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 ASB5Q8WWX0 329 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 TMEM125Q96AQ2 219 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 TUBGCP3Q96CW5 907 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 METTL2AQ96IZ6 378 aaKnown RBP8.44□□□□□ -1.06
SF3A1-206ENST00000471037 PPP1R36Q96LQ0 422 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 PPP3R2Q96LZ3 170 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 C3orf30Q96M34 536 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 RILPQ96NA2 401 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 MTERF1Q99551 399 aaKnown RBP8.44□□□□□ -1.06
SF3A1-206ENST00000471037 SERPINI1Q99574 410 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 ACPTQ9BZG2 426 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 CLK4Q9HAZ1 481 aaKnown RBP8.44□□□□□ -1.06
SF3A1-206ENST00000471037 PRM3Q9NNZ6 103 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 TCF7L2Q9NQB0 619 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 DMRT3Q9NQL9 472 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 PLSCR2Q9NRY7 297 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 FARSBQ9NSD9 589 aaKnown RBP8.44□□□□□ -1.06
SF3A1-206ENST00000471037 NMRK1Q9NWW6 199 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 TNFRSF10DQ9UBN6 386 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 ZFP69BQ9UJL9 534 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 TRIM33Q9UPN9 1127 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 KLF13Q9Y2Y9 288 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-206ENST00000471037 CCL27Q9Y4X3 112 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 MTORP42345 2549 aa8.44□□□□□ -1.06
SF3A1-206ENST00000471037 IGKV3D-11A0A0A0MRZ8 115 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 ATP6AP2A0A1C7CYW4 349 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 TCRBV16S1A1N1A0A5B0 115 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 FCHO1O14526 889 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 TFECO14948 347 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-206ENST00000471037 LSM1O15116 133 aaKnown RBP8.43□□□□□ -1.06
SF3A1-206ENST00000471037 NDUFS4O43181 175 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 CHST10O43529 356 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 PRMT3O60678 531 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 ATP6AP2O75787 350 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 SEMA3DO95025 777 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 CD1EP15812 388 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 PCSK2P16519 638 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 LBPP18428 481 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 PTX3P26022 381 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-206ENST00000471037 EPHA3P29320 983 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 PTGS2P35354 604 aa8.43□□□□□ -1.06
SF3A1-206ENST00000471037 MEOX1P50221 254 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms