RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 IRGCQ6NXR0 463 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ZCCHC12Q6PEW1 402 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 CWC27Q6UX04 472 aaKnown RBP3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ASRGL1Q7L266 308 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ADGRD2Q7Z7M1 963 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 YRDCQ86U90 279 aaKnown RBP3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ZNF329Q86UD4 541 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ITIH5Q86UX2 942 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 RNF148Q8N7C7 305 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ICA1LQ8NDH6 482 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 RDH11Q8TC12 318 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 SPPL2AQ8TCT8 520 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 RSPH1Q8WYR4 309 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 PHYHIPQ92561 330 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 C16orf58Q96GQ5 468 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ATXN7L3BQ96GX2 97 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 C16orf45Q96MC5 204 aaPredicted RBP3.42□□□□□ -1.86
PRPF3-204ENST00000470824 JPH2Q9BR39 696 aaPredicted RBP3.42□□□□□ -1.86
PRPF3-204ENST00000470824 DCTN5Q9BTE1 182 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ANP32EQ9BTT0 268 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 TMEM231Q9H6L2 316 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ZDHHC18Q9NUE0 388 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 EPS15L1Q9UBC2 864 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ABCC1P33527 1531 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 PTPRTO14522 1441 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 NCOA1Q15788 1441 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 SCAPERQ9BY12 1400 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 CEP170BQ9Y4F5 1589 aaPredicted RBP3.42□□□□□ -1.86
PRPF3-204ENST00000470824 FAM205AQ6ZU69 1335 aa3.42□□□□□ -1.86
PRPF3-204ENST00000470824 ATP10AO60312 1499 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 ZNF518AQ6AHZ1 1483 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 NPC1L1Q9UHC9 1359 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.41□□□□□ -1.86
PRPF3-204ENST00000470824 NEDD8-MDP1E9PL57 170 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 G3V2L1 256 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 GRID2O43424 1007 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 TSPAN2O60636 221 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 PTBP3O95758 552 aaKnown RBP3.41□□□□□ -1.86
PRPF3-204ENST00000470824 FCER2P06734 321 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 FHP07954 510 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 SLC6A8P48029 635 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 ZNF131P52739 623 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 MYBPC1Q00872 1141 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 SNX1Q13596 522 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 DPYSQ14117 519 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 SLC17A1Q14916 467 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 FASTKD3Q14CZ7 662 aaKnown RBP3.41□□□□□ -1.86
PRPF3-204ENST00000470824 NECTIN1Q15223 517 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 MLF2Q15773 248 aaPredicted RBP3.41□□□□□ -1.86
PRPF3-204ENST00000470824 UPP1Q16831 310 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 ECSCRQ19T08 205 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 GLIPR1L2Q4G1C9 344 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 DCAF12Q5T6F0 453 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 FAM159AQ6UWV7 190 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 UNC5DQ6UXZ4 953 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 TMEM26Q6ZUK4 368 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 LRRTM1Q86UE6 522 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 SLC22A16Q86VW1 577 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 ZFAND4Q86XD8 727 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 LINC00518Q8N0U6 118 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 TEX9Q8N6V9 391 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 FAM71CQ8NEG0 241 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 OR56B1Q8NGI3 324 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 CCDC110Q8TBZ0 833 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.41□□□□□ -1.86
PRPF3-204ENST00000470824 PCNPQ8WW12 178 aaKnown RBP3.41□□□□□ -1.86
PRPF3-204ENST00000470824 TMEM37Q8WXS4 190 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 FCGR1BQ92637 280 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 P3H4Q92791 437 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 TMEM45BQ96B21 275 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 COG3Q96JB2 828 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 LGMNQ99538 433 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 FGFBP2Q9BYJ0 223 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 NMNAT2Q9BZQ4 307 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 UPF3AQ9H1J1 476 aaKnown RBP3.41□□□□□ -1.86
PRPF3-204ENST00000470824 RWDD1Q9H446 243 aaPredicted RBP3.41□□□□□ -1.86
PRPF3-204ENST00000470824 DCTPP1Q9H773 170 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 WDR41Q9HAD4 459 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 IL1RAPQ9NPH3 570 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 POLE3Q9NRF9 147 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 THEGQ9P2T0 379 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 LHX3Q9UBR4 397 aa3.41□□□□□ -1.86
PRPF3-204ENST00000470824 MYH14Q7Z406 1995 aaKnown RBP3.41□□□□□ -1.86
PRPF3-204ENST00000470824 AGLP35573 1532 aa3.4□□□□□ -1.86
PRPF3-204ENST00000470824 IGHV3-38A0A0C4DH36 116 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 RGSL1A5PLK6 1076 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 SH2D1BO14796 132 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 ARHGEF9O43307 516 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 TRIM49P0CI25 452 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 TRIM49CP0CI26 452 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 ADORA3P0DMS8 318 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 CD1DP15813 335 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 TMOD1P28289 359 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 ID1P41134 155 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 MAGEA4P43358 317 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 MTIF2P46199 727 aaKnown RBP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 NDST1P52848 882 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 ATP12AP54707 1039 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 PEX3P56589 373 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 POLR2FP61218 127 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms