RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ZNF581Q9P0T4 197 aa3.05□□□□□ -1.92
BRCA2-202ENST00000470094 ZNF319Q9P2F9 582 aa3.05□□□□□ -1.92
BRCA2-202ENST00000470094 ZNF107Q9UII5 783 aaPredicted RBP3.05□□□□□ -1.92
BRCA2-202ENST00000470094 DNPEPQ9ULA0 475 aa3.05□□□□□ -1.92
BRCA2-202ENST00000470094 TMCC3Q9ULS5 477 aa3.05□□□□□ -1.92
BRCA2-202ENST00000470094 NIP7Q9Y221 180 aaKnown RBP eCLIP3.05□□□□□ -1.92
BRCA2-202ENST00000470094 KIAA1217Q5T5P2 1943 aa3.05□□□□□ -1.92
BRCA2-202ENST00000470094 ADAMTS9Q9P2N4 1935 aa3.05□□□□□ -1.92
BRCA2-202ENST00000470094 TRBV5-4A0A0C4DH59 114 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 MACROD2A1Z1Q3 448 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 M0R296 226 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 PSMD3O43242 534 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 ATP6V1G1O75348 118 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 OR6B1O95007 311 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 GUCA1CO95843 209 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 IGHG1P01857 330 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 CHRNGP07510 517 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 ZNF18P17022 549 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 SPRP35270 261 aaPredicted RBP3.04□□□□□ -1.92
BRCA2-202ENST00000470094 ELK3P41970 407 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 ASMTP46597 345 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 SLC1A6P48664 564 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 HSD17B7P56937 341 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 RPS27AP62979 156 aaKnown RBP3.04□□□□□ -1.92
BRCA2-202ENST00000470094 ITPK1Q13572 414 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 ZNF506Q5JVG8 444 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 LYPLAL1Q5VWZ2 237 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 RNLSQ5VYX0 342 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 NEPROQ6NW34 567 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 VITQ6UXI7 678 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 ISLR2Q6UXK2 745 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 TMEM64Q6YI46 380 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 HSCBQ8IWL3 235 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 GPR148Q8TDV2 347 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 AGAP11Q8TF27 550 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 MRPL38Q96DV4 380 aaKnown RBP3.04□□□□□ -1.92
BRCA2-202ENST00000470094 C16orf45Q96MC5 204 aaPredicted RBP3.04□□□□□ -1.92
BRCA2-202ENST00000470094 RCHY1Q96PM5 261 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 NTMT1Q9BV86 223 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 DCLRE1BQ9H816 532 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 LIN28AQ9H9Z2 209 aaKnown RBP3.04□□□□□ -1.92
BRCA2-202ENST00000470094 PSORS1C1Q9UIG5 152 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 BLOC1S6Q9UL45 172 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 SPATA2Q9UM82 520 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 AURKCQ9UQB9 309 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 PLEKHA6Q9Y2H5 1048 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 ETV7Q9Y603 341 aa3.04□□□□□ -1.92
BRCA2-202ENST00000470094 RALGAPA1Q6GYQ0 2036 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 SALL1Q9NSC2 1324 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 K7EPI3 171 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 CPLX1O14810 134 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 CALCAP01258 141 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 PGK2P07205 417 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 ODC1P11926 461 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 ANPEPP15144 967 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 CYP3A5P20815 502 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 CHRNA3P32297 505 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 KIF5BP33176 963 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 OR1D2P34982 312 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 NSFP46459 744 aaKnown RBP3.03□□□□□ -1.92
BRCA2-202ENST00000470094 PITPNBP48739 271 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 KCNK10P57789 538 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 KRT31Q15323 416 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 TAF7Q15545 349 aaPredicted RBP3.03□□□□□ -1.92
BRCA2-202ENST00000470094 INAQ16352 499 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 STX1AQ16623 288 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 OR6B2Q6IFH4 312 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 BAIAP2L2Q6UXY1 529 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 WDR88Q6ZMY6 472 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 NUFIP2Q7Z417 695 aaKnown RBP3.03□□□□□ -1.92
BRCA2-202ENST00000470094 TAF8Q7Z7C8 310 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 FBXW8Q8N3Y1 598 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 ZBTB44Q8NCP5 570 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 SPATA18Q8TC71 538 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 ITLN1Q8WWA0 313 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 SYAP1Q96A49 352 aaPredicted RBP3.03□□□□□ -1.92
BRCA2-202ENST00000470094 C14orf79Q96F83 325 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 GUCD1Q96NT3 240 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 SPAG8Q99932 426 aaPredicted RBP3.03□□□□□ -1.92
BRCA2-202ENST00000470094 NUSAP1Q9BXS6 441 aaKnown RBP3.03□□□□□ -1.92
BRCA2-202ENST00000470094 LIME1Q9H400 295 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 SOHLH2Q9NX45 425 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 NARFQ9UHQ1 456 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 ZNF346Q9UL40 294 aaKnown RBP3.03□□□□□ -1.92
BRCA2-202ENST00000470094 PLA2G4CQ9UP65 541 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 EXOC7Q9UPT5 735 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 MRPL11Q9Y3B7 192 aaKnown RBP3.03□□□□□ -1.92
BRCA2-202ENST00000470094 CPQQ9Y646 472 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 AP1M2Q9Y6Q5 423 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 CROCCQ5TZA2 2017 aa3.03□□□□□ -1.92
BRCA2-202ENST00000470094 ATP8B3O60423 1300 aa3.02□□□□□ -1.93
BRCA2-202ENST00000470094 FAM205AQ6ZU69 1335 aa3.02□□□□□ -1.93
BRCA2-202ENST00000470094 OR5H15A6NDH6 313 aa3.02□□□□□ -1.93
BRCA2-202ENST00000470094 NDC80O14777 642 aa3.02□□□□□ -1.93
BRCA2-202ENST00000470094 SYT7O43581 403 aa3.02□□□□□ -1.93
BRCA2-202ENST00000470094 SSX5O60225 188 aa3.02□□□□□ -1.93
BRCA2-202ENST00000470094 SMPD2O60906 423 aa3.02□□□□□ -1.93
BRCA2-202ENST00000470094 LRP3O75074 770 aa3.02□□□□□ -1.93
BRCA2-202ENST00000470094 SEMA4FO95754 770 aa3.02□□□□□ -1.93
BRCA2-202ENST00000470094 PTBP3O95758 552 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms