RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 TM4SF18Q96CE8 201 aa12.99□□□□□ -0.33
COMMD3-208ENST00000470045 SPACA9Q96E40 222 aaPredicted RBP12.99□□□□□ -0.33
COMMD3-208ENST00000470045 FAM173AQ9BQD7 235 aa12.99□□□□□ -0.33
COMMD3-208ENST00000470045 ZDHHC11Q9H8X9 412 aa12.99□□□□□ -0.33
COMMD3-208ENST00000470045 SUCOQ9UBS9 1254 aaKnown RBP12.99□□□□□ -0.33
COMMD3-208ENST00000470045 MCM8Q9UJA3 840 aa12.99□□□□□ -0.33
COMMD3-208ENST00000470045 GRID1Q9ULK0 1009 aa12.99□□□□□ -0.33
COMMD3-208ENST00000470045 NBPF19A0A087WUL8 3843 aa12.99□□□□□ -0.33
COMMD3-208ENST00000470045 ZNF407Q9C0G0 2248 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 CENPEQ02224 2701 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 CRYBG3Q68DQ2 2970 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 PCNX1Q96RV3 2341 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 UBFD1O14562 309 aaKnown RBP12.98□□□□□ -0.33
COMMD3-208ENST00000470045 ULK1O75385 1050 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 GLSO94925 669 aaPredicted RBP12.98□□□□□ -0.33
COMMD3-208ENST00000470045 ATP1B1P05026 303 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 NUDT17P0C025 328 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 FBXO45P0C2W1 286 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 CCL3P10147 92 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 MYL2P10916 166 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 PORP16435 677 aaPredicted RBP12.98□□□□□ -0.33
COMMD3-208ENST00000470045 KRT15P19012 456 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 S1PR1P21453 382 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 CNR1P21554 472 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 COL8A1P27658 744 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 SSTR4P31391 388 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 SOX18P35713 384 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 DCTP40126 519 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 CCT5P48643 541 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 XKP51811 444 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 DNAJB13P59910 316 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 VSNL1P62760 191 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 SLC18A2Q05940 514 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 FOXO1Q12778 655 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 HYAL4Q2M3T9 481 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 GALNT18Q6P9A2 607 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 RPTNQ6XPR3 784 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 RGS9BPQ6ZS82 235 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 GK5Q6ZS86 529 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 FRMD7Q6ZUT3 714 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 MMP21Q8N119 569 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 ZNF808Q8N4W9 903 aaPredicted RBP12.98□□□□□ -0.33
COMMD3-208ENST00000470045 ZNF615Q8N8J6 731 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 PAQR8Q8TEZ7 354 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 TP53INP1Q96A56 240 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 KCNA7Q96RP8 456 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 SACM1LQ9NTJ5 587 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 SIRT5Q9NXA8 310 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 MKS1Q9NXB0 559 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 SH3BGRL2Q9UJC5 107 aa12.98□□□□□ -0.33
COMMD3-208ENST00000470045 CELSR2Q9HCU4 2923 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 GOLGA6L10A6NI86 522 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 SMIM23A6NLE4 172 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 H3BQF6 201 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 ABOP16442 354 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 FOXA1P55317 472 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 RAE1P78406 368 aaKnown RBP12.97□□□□□ -0.33
COMMD3-208ENST00000470045 LSM11P83369 360 aaKnown RBP eCLIP12.97□□□□□ -0.33
COMMD3-208ENST00000470045 ADORA2A-AS1P86434 159 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 MGAT2Q10469 447 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 ART3Q13508 389 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 PRICKLE4Q2TBC4 344 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 SPIN4Q56A73 249 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 CCNYL1Q8N7R7 359 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 C17orf47Q8NEP4 570 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 OR52N2Q8NGI0 321 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 PHF10Q8WUB8 498 aaKnown RBP12.97□□□□□ -0.33
COMMD3-208ENST00000470045 ADIPOR1Q96A54 375 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 CTHRC1Q96CG8 243 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 ZNF681Q96N22 645 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 GAL3ST4Q96RP7 486 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 FAIM2Q9BWQ8 316 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 TTTY12Q9BZ98 90 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 MID1IP1Q9NPA3 183 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 OXSMQ9NWU1 459 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 MAT2BQ9NZL9 334 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 ZNF639Q9UID6 485 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 MEMO1Q9Y316 297 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 TIMM22Q9Y584 194 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 CHCHD2Q9Y6H1 151 aaPredicted RBP12.97□□□□□ -0.33
COMMD3-208ENST00000470045 NCKAP5O14513 1909 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 DNAJC13O75165 2243 aa12.97□□□□□ -0.33
COMMD3-208ENST00000470045 ITPR2Q14571 2701 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 A0A1B0GTH9 108 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 C2orf92A0A1B0GVN3 265 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 CCDC151A5D8V7 595 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 G3V3Y1 287 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 ACOT7O00154 380 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 COPEO14579 308 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 ADAM10O14672 748 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 ZNHIT1O43257 154 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 PCDH7O60245 1069 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 IGHG3P01860 377 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 P04436 131 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 KRT4P19013 534 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 AGAP20933 346 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 TIA1P31483 386 aaKnown RBP eCLIP12.96□□□□□ -0.33
COMMD3-208ENST00000470045 NR0B1P51843 470 aaKnown RBP12.96□□□□□ -0.33
COMMD3-208ENST00000470045 NAGLUP54802 743 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 PPIAP62937 165 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms