RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TECRLQ5HYJ1 363 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 HLA-DQA1Q5Y7H0 255 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 TTC19Q6DKK2 380 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-210ENST00000469897 ZNF572Q7Z3I7 529 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-210ENST00000469897 TMEM200AQ86VY9 491 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 DND1Q8IYX4 353 aaKnown RBP12.2□□□□□ -0.46
CPSF4-210ENST00000469897 TAGAPQ8N103 731 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 LIX1Q8N485 282 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 OR4K14Q8NGD5 310 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 NEIL3Q8TAT5 605 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 TP53INP1Q96A56 240 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 NSUN5Q96P11 429 aaKnown RBP12.2□□□□□ -0.46
CPSF4-210ENST00000469897 SERPINI1Q99574 410 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 DOHHQ9BU89 302 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 OR10A5Q9H207 317 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 ZNF703Q9H7S9 590 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-210ENST00000469897 CXorf21Q9HAI6 301 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 TEX10Q9NXF1 929 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-210ENST00000469897 KCNN3Q9UGI6 736 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 NPFFR2Q9Y5X5 522 aa12.2□□□□□ -0.46
CPSF4-210ENST00000469897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.2□□□□□ -0.46
CPSF4-210ENST00000469897 ANKRD33BA6NCL7 494 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 TRIM3O75382 744 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-210ENST00000469897 TRAPPC6AO75865 159 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 RBP1P09455 135 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 NT5EP21589 574 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 CCNG1P51959 295 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 FBXW4P57775 412 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 DUSP8Q13202 625 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 CCNYL2Q5T2Q4 361 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 FRG2Q64ET8 278 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 BICRALQ6AI39 1079 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 METTL2BQ6P1Q9 378 aaKnown RBP12.19□□□□□ -0.46
CPSF4-210ENST00000469897 SPNS3Q6ZMD2 512 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 SEM1Q6ZVN7 128 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 RPS27LQ71UM5 84 aaKnown RBP12.19□□□□□ -0.46
CPSF4-210ENST00000469897 WDR53Q7Z5U6 358 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-210ENST00000469897 MILR1Q7Z6M3 343 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 GALNT12Q8IXK2 581 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 ULK2Q8IYT8 1036 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 ZNF615Q8N8J6 731 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 ZNF441Q8N8Z8 693 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 NRGNQ92686 78 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 GNRHR2Q96P88 292 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 FRG2BQ96QU4 278 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 NTMT1Q9BV86 223 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 MRPL1Q9BYD6 325 aaKnown RBP12.19□□□□□ -0.46
CPSF4-210ENST00000469897 ZBTB26Q9HCK0 441 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 QPCTLQ9NXS2 382 aa12.19□□□□□ -0.46
CPSF4-210ENST00000469897 DCHS2Q6V1P9 2916 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 C15orf38-AP3S2A0A0A6YYH1 394 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 CAPN14A8MX76 684 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 PPP6CO00743 305 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 TP53I11O14683 189 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 ZWINTO95229 277 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 GDF1P27539 372 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 WNT3P56703 355 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 FUT7Q11130 342 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 RIPPLY2Q5TAB7 128 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 OR52E8Q6IFG1 317 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 C8orf74Q6P047 294 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 ARSKQ6UWY0 536 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 PRR22Q8IZ63 422 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 OR4F6Q8NGB9 312 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 SPPL2AQ8TCT8 520 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 ADIPOR1Q96A54 375 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 TIMP4Q99727 224 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 ANGPTL4Q9BY76 406 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 ACSS3Q9H6R3 686 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 FARSBQ9NSD9 589 aaKnown RBP12.18□□□□□ -0.46
CPSF4-210ENST00000469897 AHSPQ9NZD4 102 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 B4GALT7Q9UBV7 327 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 PCTPQ9UKL6 214 aa12.18□□□□□ -0.46
CPSF4-210ENST00000469897 NCOA6Q14686 2063 aaPredicted RBP12.18□□□□□ -0.46
CPSF4-210ENST00000469897 A0A1B0GTL3 188 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 AHRRA9YTQ3 701 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 KDM4EB2RXH2 506 aaPredicted RBP12.17□□□□□ -0.46
CPSF4-210ENST00000469897 FAM47E-STBD1D6RA91 191 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 SYT5O00445 386 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 SMIM24O75264 130 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 SEMA3DO95025 777 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 SNX4O95219 450 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 INHBAP08476 426 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 CPMP14384 443 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 PORP16435 677 aaPredicted RBP12.17□□□□□ -0.46
CPSF4-210ENST00000469897 TSPAN8P19075 237 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 S1PR1P21453 382 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 FEN1P39748 380 aaKnown RBP12.17□□□□□ -0.46
CPSF4-210ENST00000469897 CASP3P42574 277 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 CDH13P55290 713 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 IFT88Q13099 833 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 RPS6KA2Q15349 733 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 SLC25A35Q3KQZ1 300 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 TBCELQ5QJ74 424 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 FAM219BQ5XKK7 198 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 FAM111BQ6SJ93 734 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 PACS2Q86VP3 889 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 ZZZ3Q8IYH5 903 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 MMP21Q8N119 569 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 METTL4Q8N3J2 472 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms