RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 CLCA1A8K7I4 914 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 GABRR3A8MPY1 467 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 A8MUI8 341 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 F8W8V4 182 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 H3BUI4 141 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 LIN7AO14910 233 aaPredicted RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 CDC40O60508 579 aaKnown RBP eCLIP4.34□□□□□ -1.71
VPS8-219ENST00000469479 DNAJB6O75190 326 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 NDST3O95803 873 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 POLBP06746 335 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 HSP90AA1P07900 732 aaKnown RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 ANXA5P08758 320 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 CCDC172P0C7W6 258 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 FAM157CP0CG43 387 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 CREB1P16220 341 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 MAGP20916 626 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 MIPP30301 263 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 GNALP38405 381 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 OR1D4P47884 311 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 CYB561P49447 251 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 PRLHRP49683 370 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 MAP2K6P52564 334 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 GAS1P54826 345 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 UCP3P55916 312 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 RPL7AP62424 266 aaKnown RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 RPL36AP83881 106 aaKnown RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 EEF1A2Q05639 463 aaKnown RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 PPIDQ08752 370 aaKnown RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 PIN1Q13526 163 aaPredicted RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 CCNIQ14094 377 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 BECN1Q14457 450 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 SF3B4Q15427 424 aaKnown RBP eCLIP4.34□□□□□ -1.711e-7■■■■□ 24.8
VPS8-219ENST00000469479 BTBD16Q32M84 506 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 GARNL3Q5VVW2 1013 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 BHLHB9Q6PI77 547 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 MAATS1Q7Z4T9 603 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 DAAM2Q86T65 1068 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 TRIM73Q86UV7 250 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 ZBTB46Q86UZ6 589 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 PRSS58Q8IYP2 241 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 CFAP206Q8IYR0 622 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 MYO1HQ8N1T3 1032 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 PRR18Q8N4B5 295 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 ZFP62Q8NB50 900 aaPredicted RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 HSPH1Q92598 858 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 TFGQ92734 400 aaPredicted RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 ZUFSPQ96AP4 578 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 ZNF653Q96CK0 615 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 NTNG2Q96CW9 530 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 ZMYND19Q96E35 227 aaPredicted RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 MED30Q96HR3 178 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 TRIB3Q96RU7 358 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 C19orf43Q9BQ61 176 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 RAB11FIP5Q9BXF6 653 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 OR52A5Q9H2C5 316 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 NDST4Q9H3R1 872 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 CLSTN2Q9H4D0 955 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 TRIM45Q9H8W5 580 aaPredicted RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 KCNK13Q9HB14 408 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 MMP25Q9NPA2 562 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.34□□□□□ -1.71
VPS8-219ENST00000469479 TRPC4Q9UBN4 977 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 RWDD2AQ9UIY3 292 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 USP22Q9UPT9 525 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 EIF3LQ9Y262 564 aaKnown RBP4.34□□□□□ -1.71
VPS8-219ENST00000469479 PCDHGB3Q9Y5G1 929 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 SCINQ9Y6U3 715 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 HCFC1P51610 2035 aa4.34□□□□□ -1.71
VPS8-219ENST00000469479 SPTBP11277 2137 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 ANKRD12Q6UB98 2062 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 ISM1B1AKI9 464 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 CLIC1O00299 241 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 TXNDC9O14530 226 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 TNFRSF13BO14836 293 aaPredicted RBP4.33□□□□□ -1.72
VPS8-219ENST00000469479 HCRTR1O43613 425 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 UGT1A9O60656 530 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 VPS26AO75436 327 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 NEURL1O76050 574 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 WISP2O76076 250 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 GFPT2O94808 682 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 NDUFB8O95169 186 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 AP2A1O95782 977 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 EPOP01588 193 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 HLA-DQB2P05538 268 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 TPH1P17752 444 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 CHRNB2P17787 502 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 PRKAR1BP31321 381 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 ARRB2P32121 409 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 IFI35P80217 286 aaPredicted RBP4.33□□□□□ -1.72
VPS8-219ENST00000469479 NIPAL4Q0D2K0 466 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 MAMLD1Q13495 774 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 PTK6Q13882 451 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 PAFAH1B3Q15102 231 aaKnown RBP4.33□□□□□ -1.72
VPS8-219ENST00000469479 TPD52L1Q16890 204 aaPredicted RBP4.33□□□□□ -1.72
VPS8-219ENST00000469479 HYAL4Q2M3T9 481 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 CMPK2Q5EBM0 449 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 KHDC1LQ5JSQ8 128 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 SPINK14Q6IE38 97 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 FAM151BQ6UXP7 276 aa4.33□□□□□ -1.72
VPS8-219ENST00000469479 CYP4V2Q6ZWL3 525 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms