RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 MAD2L1Q13257 205 aaPredicted RBP11.74□□□□□ -0.53
USP11-206ENST00000469080 RIN1Q13671 783 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 PRAMEF9Q5VWM5 478 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 LNX2Q8N448 690 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 TBC1D19Q8N5T2 526 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 ZCCHC10Q8TBK6 192 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 ZNF285Q96NJ3 590 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 CCM2Q9BSQ5 444 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 DUSP26Q9BV47 211 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 ANKRA2Q9H9E1 313 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 PDP1Q9P0J1 537 aaPredicted RBP11.74□□□□□ -0.53
USP11-206ENST00000469080 TRPS1Q9UHF7 1281 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 ZNF860A6NHJ4 632 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 ETFAP13804 333 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 MEOX2P50222 304 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 ID2Q02363 134 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 KLHL12Q53G59 568 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 LYPLAL1Q5VWZ2 237 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 PYHIN1Q6K0P9 492 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 C17orf107Q6ZR85 190 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 CHMP1BQ7LBR1 199 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 VN1R5Q7Z5H4 357 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 AMZ2Q86W34 360 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 CNIH3Q8TBE1 160 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 UBE2FQ969M7 185 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 FCRL4Q96PJ5 515 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 ERVK-18Q9QC07 812 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 MLXQ9UH92 298 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 LINC00862A6NCI5 91 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 MOSPD3O75425 235 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 KAT7O95251 611 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 ADRB3P13945 408 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 TCF3P15923 654 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 NUP62P37198 522 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 ADARB1P78563 741 aaKnown RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 DMC1Q14565 340 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 ZXDCQ2QGD7 858 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 KLHL17Q6TDP4 642 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 ABCA7Q8IZY2 2146 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 OR7G3Q8NG95 312 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 OR4D10Q8NGI6 311 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 ENKURQ8TC29 256 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 DNAJA4Q8WW22 397 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 ASB11Q8WXH4 323 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 UFD1Q92890 307 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 TMCO6Q96DC7 493 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 KCNS3Q9BQ31 491 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 ZIM2Q9NZV7 527 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 COPZ2Q9P299 210 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 SERGEFQ9UGK8 458 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 FZD4Q9ULV1 537 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 SLC22A7Q9Y694 548 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 CNOT1A5YKK6 2376 aaKnown RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 H0Y8X5 98 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 EFCAB14O75071 495 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 C8GP07360 202 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 THRBP10828 461 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 HRH2P25021 359 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 XKRXQ6PP77 449 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 ZNF783Q6ZMS7 281 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 MACC1Q6ZN28 852 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 ZNF551Q7Z340 670 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 JAZF1Q86VZ6 243 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 NLRP8Q86W28 1048 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 NPAS3Q8IXF0 933 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 ZNF480Q8WV37 535 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 NELL1Q92832 810 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 GFM1Q96RP9 751 aaKnown RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 ACTR6Q9GZN1 396 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 SPNS1Q9H2V7 528 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 CUEDC1Q9NWM3 386 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 CD300AQ9UGN4 299 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 CLCA2Q9UQC9 943 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 DNMT3AQ9Y6K1 912 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 NLRC5Q86WI3 1866 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 MN1Q10571 1320 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 OR6C65A6NJZ3 312 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 AK4P27144 223 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 SLC19A1P41440 591 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 GBX2P52951 348 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 CREMQ03060 361 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 FGFBP1Q14512 234 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 MED27Q6P2C8 311 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 TSPYL5Q86VY4 417 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 MINDY1Q8N5J2 469 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 RBPMSQ93062 196 aaKnown RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 DPCDQ9BVM2 203 aaPredicted RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 UGT2B28Q9BY64 529 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 CARS2Q9HA77 564 aaKnown RBP11.73□□□□□ -0.53
USP11-206ENST00000469080 SLC23A2Q9UGH3 650 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 PPT2Q9UMR5 302 aa11.73□□□□□ -0.53
USP11-206ENST00000469080 AIREO43918 545 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 EEDO75530 441 aaKnown RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 WBP4O75554 376 aaKnown RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 HOXA1P49639 335 aaPredicted RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 CAPZA1P52907 286 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 MANFP55145 182 aaKnown RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 RPP38P78345 283 aaKnown RBP11.72□□□□□ -0.53
USP11-206ENST00000469080 SWI5Q1ZZU3 235 aa11.72□□□□□ -0.53
USP11-206ENST00000469080 ZNF852Q6ZMS4 543 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms