RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 METTL21CQ5VZV1 264 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CES4AQ5XG92 561 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 FAM71E1Q6IPT2 247 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 NOXRED1Q6NXP6 359 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PAPD4Q6PIY7 484 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ZCCHC23Q6ZST2 131 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 R3HCC1LQ7Z5L2 792 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CRLF3Q8IUI8 442 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 WDR75Q8IWA0 830 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 GALNT12Q8IXK2 581 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 GPALPP1Q8IXQ4 340 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 DDIASQ8IXT1 998 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 DND1Q8IYX4 353 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ALDH16A1Q8IZ83 802 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 LRRC25Q8N386 305 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TMEM132CQ8N3T6 1108 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 GALNT16Q8N428 558 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SLC5A8Q8N695 610 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 METTL27Q8N6F8 245 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ZNF781Q8N8C0 355 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 FAM47BQ8NA70 645 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 APCDD1LQ8NCL9 501 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 NFAM1Q8NET5 270 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 B3GNT7Q8NFL0 401 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 OR7G1Q8NGA0 311 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 OR4K14Q8NGD5 310 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 OR2T11Q8NH01 316 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PSMA8Q8TAA3 256 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 NUBPLQ8TB37 319 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ZNF675Q8TD23 568 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 LRRC8CQ8TDW0 803 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ACTRT2Q8TDY3 377 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ELP5Q8TE02 316 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PTPMT1Q8WUK0 201 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ZNF75CPQ92670 426 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TP53INP1Q96A56 240 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ANKRD9Q96BM1 317 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TESCQ96BS2 214 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TM4SF18Q96CE8 201 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CTHRC1Q96CG8 243 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TUBGCP3Q96CW5 907 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 VMP1Q96GC9 406 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 APIPQ96GX9 242 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 RBM18Q96H35 190 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 FBXL20Q96IG2 436 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PTCHD1Q96NR3 888 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 AGAP4Q96P64 663 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 KCNA7Q96RP8 456 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 LMF1Q96S06 567 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CSF3RQ99062 836 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 HBEGFQ99075 208 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PRPF18Q99633 342 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 MAPKAP1Q9BPZ7 522 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 WDR77Q9BQA1 342 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ALOXE3Q9BYJ1 711 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 BRINP2Q9C0B6 783 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SEMA4CQ9C0C4 833 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 C20orf27Q9GZN8 174 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 LHPPQ9H008 270 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TSPAN10Q9H1Z9 355 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SOX17Q9H6I2 414 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TRIM45Q9H8W5 580 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CPNE5Q9HCH3 593 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 MIEF1Q9NQG6 463 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SLC35C2Q9NQQ7 365 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ACSS2Q9NR19 701 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PRTFDC1Q9NRG1 225 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SDR39U1Q9NRG7 319 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ACSS1Q9NUB1 689 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 GIMAP4Q9NUV9 329 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ATAD3AQ9NVI7 634 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TEX10Q9NXF1 929 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 GPR83Q9NYM4 423 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ZDHHC2Q9UIJ5 367 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CES1P1Q9UKY3 287 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CFL2Q9Y281 166 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PCDHGB6Q9Y5F9 930 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 MRPS18BQ9Y676 258 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CLCA3PQ9Y6N3 262 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SHANK1Q9Y566 2161 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PTPN13Q12923 2485 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 A0A0G2JN53 185 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 DYTNA2CJ06 578 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 WDR91A4D1P6 747 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 ARGFXA6NJG6 315 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 WASHC1A8K0Z3 465 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 MYO1GB0I1T2 1018 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 FAM227AF5H4B4 570 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 SAP18O00422 153 aaKnown RBP3.28□□□□□ -1.88
TRIM59-202ENST00000468542 PLOD2O00469 737 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 RNASET2O00584 256 aaKnown RBP3.28□□□□□ -1.88
TRIM59-202ENST00000468542 ZNF195O14628 629 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 ANKRD28O15084 1053 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 SCAMP2O15127 329 aaKnown RBP3.28□□□□□ -1.88
TRIM59-202ENST00000468542 FGF17O60258 216 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 PRAMEF2O60811 474 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 EDF1O60869 148 aaKnown RBP3.28□□□□□ -1.88
TRIM59-202ENST00000468542 DNAJB6O75190 326 aa3.28□□□□□ -1.88
TRIM59-202ENST00000468542 CDC123O75794 336 aaPredicted RBP3.28□□□□□ -1.88
TRIM59-202ENST00000468542 RGS9O75916 674 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms