RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ZNF441Q8N8Z8 693 aa22.51■■□□□ 1.19
PTCH1-210ENST00000468211 SLC6A15Q9H2J7 730 aa22.51■■□□□ 1.19
PTCH1-210ENST00000468211 EXO5Q9H790 373 aa22.51■■□□□ 1.19
PTCH1-210ENST00000468211 CXorf21Q9HAI6 301 aa22.51■■□□□ 1.19
PTCH1-210ENST00000468211 CNIH4Q9P003 139 aa22.51■■□□□ 1.19
PTCH1-210ENST00000468211 A0A1B0GTL3 188 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 HOXD4P09016 255 aaPredicted RBP22.5■■□□□ 1.19
PTCH1-210ENST00000468211 GALNSP34059 522 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 PHBP35232 272 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 ARL1P40616 181 aaPredicted RBP22.5■■□□□ 1.19
PTCH1-210ENST00000468211 TRAF3Q13114 568 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 NTRK2Q16620 822 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 C1orf185Q5T7R7 199 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 METTL2BQ6P1Q9 378 aaKnown RBP22.5■■□□□ 1.19
PTCH1-210ENST00000468211 RPS27LQ71UM5 84 aaKnown RBP22.5■■□□□ 1.19
PTCH1-210ENST00000468211 SLC44A1Q8WWI5 657 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 ISL2Q96A47 359 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 SARAFQ96BY9 339 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 SERPINI1Q99574 410 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 FUT8Q9BYC5 575 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 WDR41Q9HAD4 459 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 ALKBH4Q9NXW9 302 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 PCTPQ9UKL6 214 aa22.5■■□□□ 1.19
PTCH1-210ENST00000468211 BOKQ9UMX3 212 aaPredicted RBP22.5■■□□□ 1.19
PTCH1-210ENST00000468211 KIAA1549Q9HCM3 1950 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 OR6C76A6NM76 312 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 WDR1O75083 606 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 SEMA3DO95025 777 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 SERPINB3P29508 390 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 ZFP36L2P47974 494 aaKnown RBP22.49■■□□□ 1.19
PTCH1-210ENST00000468211 TRPC1P48995 793 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 CCNG1P51959 295 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 WLSQ5T9L3 541 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 FRG2Q64ET8 278 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 BICRALQ6AI39 1079 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 OR52E8Q6IFG1 317 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 DND1Q8IYX4 353 aaKnown RBP22.49■■□□□ 1.19
PTCH1-210ENST00000468211 ATP6V1E2Q96A05 226 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 JSRP1Q96MG2 331 aaPredicted RBP22.49■■□□□ 1.19
PTCH1-210ENST00000468211 FRG2BQ96QU4 278 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 NTMT1Q9BV86 223 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 MRPL1Q9BYD6 325 aaKnown RBP22.49■■□□□ 1.19
PTCH1-210ENST00000468211 CDC42EP4Q9H3Q1 356 aaKnown RBP22.49■■□□□ 1.19
PTCH1-210ENST00000468211 XPR1Q9UBH6 696 aa22.49■■□□□ 1.19
PTCH1-210ENST00000468211 DMGDHQ9UI17 866 aaKnown RBP22.49■■□□□ 1.19
PTCH1-210ENST00000468211 C2orf92A0A1B0GVN3 265 aa22.48■■□□□ 1.19
PTCH1-210ENST00000468211 ACSL3O95573 720 aa22.48■■□□□ 1.19
PTCH1-210ENST00000468211 KLK1P06870 262 aa22.48■■□□□ 1.19
PTCH1-210ENST00000468211 DLX5P56178 289 aa22.48■■□□□ 1.19
PTCH1-210ENST00000468211 FBXW4P57775 412 aa22.48■■□□□ 1.19
PTCH1-210ENST00000468211 CKAP4Q07065 602 aaKnown RBP22.48■■□□□ 1.19
PTCH1-210ENST00000468211 RELL1Q8IUW5 271 aa22.48■■□□□ 1.19
PTCH1-210ENST00000468211 ZNF615Q8N8J6 731 aa22.48■■□□□ 1.19
PTCH1-210ENST00000468211 ACKR4Q9NPB9 350 aa22.48■■□□□ 1.19
PTCH1-210ENST00000468211 FOXO6A8MYZ6 492 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 PPP6CO00743 305 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 TRIM3O75382 744 aaPredicted RBP22.47■■□□□ 1.19
PTCH1-210ENST00000468211 RBP1P09455 135 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 PIK3R1P27986 724 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 FUT7Q11130 342 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 TBL3Q12788 808 aaKnown RBP22.47■■□□□ 1.19
PTCH1-210ENST00000468211 SGO1Q5FBB7 561 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 SEM1Q6ZVN7 128 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 MMP21Q8N119 569 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 ADIPOR1Q96A54 375 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 PAFAH2Q99487 392 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 DOHHQ9BU89 302 aa22.47■■□□□ 1.19
PTCH1-210ENST00000468211 FARSBQ9NSD9 589 aaKnown RBP22.47■■□□□ 1.19
PTCH1-210ENST00000468211 KDM4EB2RXH2 506 aaPredicted RBP22.46■■□□□ 1.19
PTCH1-210ENST00000468211 STX16-NPEPL1H3BU86 382 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 STX16O14662 325 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 INHBAP08476 426 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 XKP51811 444 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 GALNT12Q8IXK2 581 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 PRR22Q8IZ63 422 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 TAGAPQ8N103 731 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 OR4F6Q8NGB9 312 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 OR4K14Q8NGD5 310 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 NEIL3Q8TAT5 605 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 DIO2Q92813 273 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 TP53INP1Q96A56 240 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 NPFFR2Q9Y5X5 522 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 MED12Q93074 2177 aa22.46■■□□□ 1.19
PTCH1-210ENST00000468211 ANKRD33BA6NCL7 494 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 SBK3P0C264 359 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 CPMP14384 443 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 TSPAN8P19075 237 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 S1PR1P21453 382 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 SNTB1Q13884 538 aaKnown RBP22.45■■□□□ 1.18
PTCH1-210ENST00000468211 RPS6KA2Q15349 733 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 FNDC7Q5VTL7 733 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 TTC19Q6DKK2 380 aaPredicted RBP22.45■■□□□ 1.18
PTCH1-210ENST00000468211 ULK2Q8IYT8 1036 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 TMEM151AQ8N4L1 468 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 NOA1Q8NC60 698 aaKnown RBP22.45■■□□□ 1.18
PTCH1-210ENST00000468211 UHMK1Q8TAS1 419 aaKnown RBP22.45■■□□□ 1.18
PTCH1-210ENST00000468211 ZNF559Q9BR84 538 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 OR10A5Q9H207 317 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 QPCTLQ9NXS2 382 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 KCNN3Q9UGI6 736 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms