RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TMEM216Q9P0N5 145 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 A0A0G2JMM0 328 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 A0A1B0GTL3 188 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 A0A1W2PPB8 328 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 A0A1W2PRS3 328 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 PINLYPA6NC86 204 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 GOLGA6L10A6NI86 522 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 KIR3DP1A8MWS1 328 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 G3V3Y1 287 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 PPP6CO00743 305 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 ADAM10O14672 748 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 ZNHIT1O43257 154 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 SUPT7LO94864 414 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 NADKO95544 446 aaPredicted RBP17.61■□□□□ 0.41
COL7A1-207ENST00000467985 KRT6AP02538 564 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 KRT6BP04259 564 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 FBXO45P0C2W1 286 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 IMPDH1P20839 514 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 GRNP28799 593 aaKnown RBP17.61■□□□□ 0.41
COL7A1-207ENST00000467985 KRT6CP48668 564 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 XKP51811 444 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 EBPQ15125 230 aaKnown RBP17.61■□□□□ 0.41
COL7A1-207ENST00000467985 HYAL4Q2M3T9 481 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 ZNF678Q5SXM1 525 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 TMEM211Q6ICI0 200 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 FAM109AQ8N4B1 249 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 PAQR8Q8TEZ7 354 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 TP53INP1Q96A56 240 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 SH2D2AQ9NP31 389 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 FARSBQ9NSD9 589 aaKnown RBP17.61■□□□□ 0.41
COL7A1-207ENST00000467985 COQ3Q9NZJ6 369 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 PSME2Q9UL46 239 aa17.61■□□□□ 0.41
COL7A1-207ENST00000467985 CSMD1Q96PZ7 3565 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 C2orf92A0A1B0GVN3 265 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 C1orf226A1L170 272 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 OR14I1A6ND48 311 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 CAPN14A8MX76 684 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 DLX3O60479 287 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 PDE9AO76083 593 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 IGHG3P01860 377 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 CCL3P10147 92 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 CPMP14384 443 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 PORP16435 677 aaPredicted RBP17.6■□□□□ 0.41
COL7A1-207ENST00000467985 TSPAN8P19075 237 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 PTGER4P35408 488 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 TRA2BP62995 288 aaKnown RBP17.6■□□□□ 0.41
COL7A1-207ENST00000467985 FUT7Q11130 342 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 FOXO1Q12778 655 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 CSTF3Q12996 717 aaKnown RBP17.6■□□□□ 0.41
COL7A1-207ENST00000467985 UNC50Q53HI1 259 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 HLA-DQA1Q5Y7H0 255 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 C3P1Q6ZMU1 363 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 GPRIN3Q6ZVF9 776 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 FBXW8Q8N3Y1 598 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 MREGQ8N565 214 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 OR7G1Q8NGA0 311 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 VPS29Q9UBQ0 182 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 DCDC2Q9UHG0 476 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 ZNF225Q9UK10 706 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 PCDHA9Q9Y5H5 950 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 ZNF407Q9C0G0 2248 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 FBN2P35556 2912 aa17.6■□□□□ 0.41
COL7A1-207ENST00000467985 MANBAO00462 879 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 ULK1O75385 1050 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 OR4F21O95013 312 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 PYGBP11216 843 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 DNASE1L1P49184 302 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 PRKAA2P54646 552 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 GALNT1Q10472 559 aaPredicted RBP17.59■□□□□ 0.41
COL7A1-207ENST00000467985 LCP2Q13094 533 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 SLC48A1Q6P1K1 146 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 LYPD8Q6UX82 237 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 TMEM251Q8N6I4 163 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 CDYL2Q8N8U2 506 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 GBP7Q8N8V2 638 aaPredicted RBP17.59■□□□□ 0.41
COL7A1-207ENST00000467985 ZNF441Q8N8Z8 693 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 FAM13CQ8NE31 585 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 C17orf47Q8NEP4 570 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 METTL6Q8TCB7 284 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 DOK4Q8TEW6 326 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 UCN3Q969E3 161 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 CCDC126Q96EE4 140 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 L3HYPDHQ96EM0 354 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 TMEM237Q96Q45 408 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 FAIM2Q9BWQ8 316 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 PPCSQ9HAB8 311 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 TUBA8Q9NY65 449 aaPredicted RBP17.59■□□□□ 0.41
COL7A1-207ENST00000467985 BOKQ9UMX3 212 aaPredicted RBP17.59■□□□□ 0.41
COL7A1-207ENST00000467985 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.59■□□□□ 0.41
COL7A1-207ENST00000467985 CACNA1CQ13936 2221 aa17.59■□□□□ 0.41
COL7A1-207ENST00000467985 A0A1B0GVC2 190 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 TP53I11O14683 189 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 BCKDKO14874 412 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 SUSD5O60279 629 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 CLPSP04118 112 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 ENO1P06733 434 aaKnown RBP17.58■□□□□ 0.4
COL7A1-207ENST00000467985 COX6B1P14854 86 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 SSTR4P31391 388 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 PIGAP37287 484 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 MAGEA5P43359 124 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms