RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TRNT1Q96Q11 434 aaKnown RBP13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TUBA1CQ9BQE3 449 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 TMEM138Q9NPI0 162 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 COMMD3Q9UBI1 195 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 RNF6Q9Y252 685 aa13.12□□□□□ -0.31
BRAT1-203ENST00000467558 EP400Q96L91 3159 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 RFXAPO00287 272 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 FBP2O00757 339 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 PDCD5O14737 125 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 TNFRSF21O75509 655 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 ADAP00813 363 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 PABPC4LP0CB38 370 aaKnown RBP13.11□□□□□ -0.31
BRAT1-203ENST00000467558 MYF6P23409 242 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 YPEL5P62699 121 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 PPP3R1P63098 170 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 WSCD2Q2TBF2 565 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 RPL13AP3Q6NVV1 102 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 ARL9Q6T311 187 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 RNF111Q6ZNA4 994 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 TRIM46Q7Z4K8 759 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 RETREG3Q86VR2 466 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 OR2T33Q8NG76 320 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 RELTQ969Z4 430 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 CIDECQ96AQ7 238 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-203ENST00000467558 SH3YL1Q96HL8 342 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-203ENST00000467558 ASPNQ9BXN1 380 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 METTL7AQ9H8H3 244 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 MAP10Q9P2G4 905 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 ANTXRLA6NF34 631 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 ANXA2P2A6NMY6 339 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF726A6NNF4 738 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 ANXA2P07355 339 aaKnown RBP13.11□□□□□ -0.31
BRAT1-203ENST00000467558 MTHFD2P13995 350 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 CD72P21854 359 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 FBLP22087 321 aaKnown RBP13.11□□□□□ -0.31
BRAT1-203ENST00000467558 CERS1P27544 350 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 TMEM52BQ4KMG9 183 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 SLC35F1Q5T1Q4 408 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 HS6ST2Q96MM7 605 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 SLC6A16Q9GZN6 736 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 PLEKHA1Q9HB21 404 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 SEC14L4Q9UDX3 406 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 MYOCOSA0A1B0GUC4 107 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 A0A1W2PPW3 197 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 CASRP41180 1078 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 RAB15P59190 212 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 ALG1LQ6GMV1 187 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 RAB43Q86YS6 212 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 FKBP10Q96AY3 582 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 TMCO6Q96DC7 493 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 PEX11GQ96HA9 241 aa13.11□□□□□ -0.31
BRAT1-203ENST00000467558 INSM2Q96T92 566 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-203ENST00000467558 A0A0J9YY10 115 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 PPM1BO75688 479 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 RAB25P57735 213 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 NUMA1Q14980 2115 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 SHHQ15465 462 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 ATG14Q6ZNE5 492 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 MARCH9Q86YJ5 346 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 NXPE3Q969Y0 559 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 MYEOVQ96EZ4 313 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 SLC29A1Q99808 456 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 ANKRD60Q9BZ19 345 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 EXOSC1Q9Y3B2 195 aaKnown RBP13.1□□□□□ -0.31
BRAT1-203ENST00000467558 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 PSIP1O75475 530 aaKnown RBP13.1□□□□□ -0.31
BRAT1-203ENST00000467558 ARL6IP5O75915 188 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 HIST1H1TP22492 207 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-203ENST00000467558 GNALP38405 381 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 CD47Q08722 323 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 DUSP6Q16828 381 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 HENMT1Q5T8I9 393 aaKnown RBP13.1□□□□□ -0.31
BRAT1-203ENST00000467558 FIGNL1Q6PIW4 674 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 Q6ZNB5 142 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 HMGN2P46Q86SG4 172 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 GID4Q8IVV7 300 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 OR2AJ1Q8NGZ0 328 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 TMEM234Q8WY98 164 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 PTGES2Q9H7Z7 377 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 MARCH7Q9H992 704 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 AGPAT4Q9NRZ5 378 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 MKL2Q9ULH7 1088 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 PEX12O00623 359 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 TBX1O43435 398 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 HCRTR2O43614 444 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 NR2C1P13056 603 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 GM2AP17900 193 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 TMBIM6P55061 237 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 GBX1Q14549 363 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 PUM1Q14671 1186 aaKnown RBP eCLIP13.1□□□□□ -0.31
BRAT1-203ENST00000467558 NNATQ16517 81 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 DEFB110Q30KQ9 67 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 SLCO4C1Q6ZQN7 724 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 CDRT4Q8N9R6 151 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 OR5M3Q8NGP4 307 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 FANK1Q8TC84 345 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 MS4A4EQ96PG1 132 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 HHIPQ96QV1 700 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 SORBS1Q9BX66 1292 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms