RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 QSOX2Q6ZRP7 698 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 SLC43A3Q8NBI5 491 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 HCAR2Q8TDS4 363 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 GATAD2BQ8WXI9 593 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 NEURL3Q96EH8 262 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 GPA33Q99795 319 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 ABCG4Q9H172 646 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 MIEF1Q9NQG6 463 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 TOR4AQ9NXH8 423 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 COMMD3Q9UBI1 195 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 ICKQ9UPZ9 632 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 ANKDD1BA6NHY2 528 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 NRG2O14511 850 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 HOXA2O43364 376 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 ATG13O75143 517 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 URODP06132 367 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 PSKH1P11801 424 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 HOXD11P31277 338 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 VIPR1P32241 457 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 CD79BP40259 229 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 KCNJ5P48544 419 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 PRLHRP49683 370 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 TPBGQ13641 420 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 SLC25A30Q5SVS4 291 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 SPOUT1Q5T280 376 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 TPGS2Q68CL5 300 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 LHX8Q68G74 356 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 PODNL1Q6PEZ8 512 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 HTR3DQ70Z44 454 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 TRAM1L1Q8N609 369 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF557Q8N988 423 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 DEDD2Q8WXF8 326 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 ZC3HAV1LQ96H79 300 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 RBFOX1Q9NWB1 397 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 DKK3Q9UBP4 350 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 A4GNTQ9UNA3 340 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 DNMT3AQ9Y6K1 912 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 TPD52L2O43399 206 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 HCN1O60741 890 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 NME6O75414 186 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 C1QBP02746 253 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 INHAP05111 366 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 CKMP06732 381 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 SLC2A2P11168 524 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 MMP11P24347 488 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 IL12RB1P42701 662 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 SNRPD2P62316 118 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 ALDH6A1Q02252 535 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 C3orf38Q5JPI3 329 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 LAMTOR1Q6IAA8 161 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 DEFB128Q7Z7B8 93 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 ZER1Q7Z7L7 766 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 Q8N402 240 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 UPRTQ96BW1 309 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF354BQ96LW1 612 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 TEFMQ96QE5 360 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 CITED4Q96RK1 184 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 DCLRE1CQ96SD1 692 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 SGPP1Q9BX95 441 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 NIPAL2Q9H841 368 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 DYRK1BQ9Y463 629 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 ANHXE9PGG2 379 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 SMLR1H3BR10 107 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 HPGDSO60760 199 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 OR12D1P0DN82 309 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF30P17039 623 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 HOXD10P28358 340 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 GIPRP48546 466 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 SIGIRRQ6IA17 410 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 PLCZ1Q86YW0 608 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 ADGRF3Q8IZF5 1079 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 ZFP41Q8N8Y5 198 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 TMEM145Q8NBT3 493 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 DUSP18Q8NEJ0 188 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 TIFAQ96CG3 184 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 MED30Q96HR3 178 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 IGSF21Q96ID5 467 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 FOPNLQ96NB1 174 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 HMX1Q9NP08 348 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 NLKQ9UBE8 527 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 FBXW2Q9UKT8 454 aa12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 PRRC2BQ5JSZ5 2229 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-205ENST00000466780 HMGN4O00479 90 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 SLC30A4O14863 429 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 PQBP1O60828 265 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 CRYZL1O95825 349 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 DDX5P17844 614 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 POLR2LP62875 67 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 PPP3R1P63098 170 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 TMEM115Q12893 351 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 BTBD16Q32M84 506 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 TMEM220Q6QAJ8 160 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 NXPE4Q6UWF7 544 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 IKBIPQ70UQ0 350 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 GAREM2Q75VX8 874 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 TMC8Q8IU68 726 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 LRRC56Q8IYG6 542 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms