RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 MIEF2Q96C03 454 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 SNRNP40Q96DI7 357 aaKnown RBP8.85□□□□□ -0.99
ATG3-203ENST00000465980 NSL1Q96IY1 281 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 MARK4Q96L34 752 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 FCRL1Q96LA6 429 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 SERPINI1Q99574 410 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 SLC26A1Q9H2B4 701 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 ZNF160Q9HCG1 818 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 SDR39U1Q9NRG7 319 aaPredicted RBP8.85□□□□□ -0.99
ATG3-203ENST00000465980 SEMA3GQ9NS98 782 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 ASF1BQ9NVP2 202 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 AIG1Q9NVV5 245 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 TMEM45AQ9NWC5 275 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 SIRT5Q9NXA8 310 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 TRPC4Q9UBN4 977 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 C3orf18Q9UK00 162 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 NXT1Q9UKK6 140 aaKnown RBP8.85□□□□□ -0.99
ATG3-203ENST00000465980 SLC12A4Q9UP95 1085 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 EIF3LQ9Y262 564 aaKnown RBP8.85□□□□□ -0.99
ATG3-203ENST00000465980 RUVBL1Q9Y265 456 aaKnown RBP8.85□□□□□ -0.99
ATG3-203ENST00000465980 TMED5Q9Y3A6 229 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 GPR45Q9Y5Y3 372 aa8.85□□□□□ -0.99
ATG3-203ENST00000465980 GTF3C1Q12789 2109 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 A0A0A6YYC8 382 aaPredicted RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 A1L4Q6 167 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 VSTM2BA6NLU5 285 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 I3L1I5 382 aaPredicted RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 PSMD12O00232 456 aaPredicted RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 P2RX6O15547 441 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 LCMT2O60294 686 aaKnown RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 SEMA3DO95025 777 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 ETHE1O95571 254 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 ONECUT2O95948 504 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 ZGLP1P0C6A0 271 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 RNF224P0DH78 156 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 PRPS2P11908 318 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 GP1BBP13224 206 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 EZRP15311 586 aaKnown RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 GPX3P22352 226 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 CALB2P22676 271 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 PIK3R1P27986 724 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 MAPK1P28482 360 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 AHRP35869 848 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 DIO3P55073 304 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 RPS15AP62244 130 aaKnown RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 EEF1A2Q05639 463 aaKnown RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 TBL3Q12788 808 aaKnown RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 CUL3Q13618 768 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 HERC3Q15034 1050 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 RPS6KA2Q15349 733 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 SYT16Q17RD7 645 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 CROCCQ5TZA2 2017 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 PRMT9Q6P2P2 845 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 LINC00696Q6ZRV3 163 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 MIER2Q8N344 545 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 MFSD9Q8NBP5 474 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 TRPV3Q8NET8 790 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 RP9Q8TA86 221 aaKnown RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 CREB3L4Q8TEY5 395 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 CHTF18Q8WVB6 975 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 TM9SF4Q92544 642 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 CMTM5Q96DZ9 223 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 MMABQ96EY8 250 aaPredicted RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 C11orf24Q96F05 449 aaPredicted RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 APIPQ96GX9 242 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 THOC3Q96J01 351 aaKnown RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 C1orf50Q9BV19 199 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 MS4A8Q9BY19 250 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 ZIM2Q9NZV7 527 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 ZNF282Q9UDV7 671 aaPredicted RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 TAGLN3Q9UI15 199 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 NTNG1Q9Y2I2 539 aa8.84□□□□□ -0.99
ATG3-203ENST00000465980 POLR3HQ9Y535 204 aaPredicted RBP8.84□□□□□ -0.99
ATG3-203ENST00000465980 MEGF11A6BM72 1044 aa8.83□□□□□ -1
ATG3-203ENST00000465980 ANKRD28O15084 1053 aa8.83□□□□□ -1
ATG3-203ENST00000465980 HNRNPCL1O60812 293 aaKnown RBP8.83□□□□□ -1
ATG3-203ENST00000465980 MYO1DO94832 1006 aa8.83□□□□□ -1
ATG3-203ENST00000465980 UNC5CO95185 931 aa8.83□□□□□ -1
ATG3-203ENST00000465980 CBX6O95503 412 aa8.83□□□□□ -1
ATG3-203ENST00000465980 TBX6O95947 436 aaPredicted RBP8.83□□□□□ -1
ATG3-203ENST00000465980 G6PDP11413 515 aa8.83□□□□□ -1
ATG3-203ENST00000465980 ESRRAP11474 423 aaPredicted RBP8.83□□□□□ -1
ATG3-203ENST00000465980 BCKDHAP12694 445 aa8.83□□□□□ -1
ATG3-203ENST00000465980 COX4I1P13073 169 aa8.83□□□□□ -1
ATG3-203ENST00000465980 BCL6P41182 706 aa8.83□□□□□ -1
ATG3-203ENST00000465980 EMP2P54851 167 aa8.83□□□□□ -1
ATG3-203ENST00000465980 MAT1AQ00266 395 aaKnown RBP8.83□□□□□ -1
ATG3-203ENST00000465980 ACSM2AQ08AH3 577 aa8.83□□□□□ -1
ATG3-203ENST00000465980 Q0VFX4 171 aa8.83□□□□□ -1
ATG3-203ENST00000465980 MAPRE2Q15555 327 aa8.83□□□□□ -1
ATG3-203ENST00000465980 SPRED3Q2MJR0 410 aa8.83□□□□□ -1
ATG3-203ENST00000465980 AGKQ53H12 422 aa8.83□□□□□ -1
ATG3-203ENST00000465980 SPIN4Q56A73 249 aa8.83□□□□□ -1
ATG3-203ENST00000465980 DEPDC1Q5TB30 811 aa8.83□□□□□ -1
ATG3-203ENST00000465980 AGAP7PQ5VUJ5 663 aa8.83□□□□□ -1
ATG3-203ENST00000465980 KHDRBS2Q5VWX1 349 aaKnown RBP8.83□□□□□ -1
ATG3-203ENST00000465980 ACSM2BQ68CK6 577 aa8.83□□□□□ -1
ATG3-203ENST00000465980 NOXRED1Q6NXP6 359 aa8.83□□□□□ -1
ATG3-203ENST00000465980 GALNT18Q6P9A2 607 aa8.83□□□□□ -1
ATG3-203ENST00000465980 CYP20A1Q6UW02 462 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms