RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PPIL1Q9Y3C6 166 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 BTN3A3O00478 584 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 ZNF197O14709 1029 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 FABP7O15540 132 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 SH3BP5O60239 455 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 SH3BGRLO75368 114 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 TP53P04637 393 aaPredicted RBP18.72■□□□□ 0.59
SDF4-205ENST00000465727 SLC6A1P30531 599 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 GKP32189 559 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 BDKRB1P46663 353 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 EFNB1P98172 346 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 NFE2L1Q14494 772 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 FAM71E1Q6IPT2 247 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 LRRC17Q8N6Y2 441 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 OR56A3Q8NH54 315 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 FGF11Q92914 225 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 TM9SF2Q99805 663 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 FUZQ9BT04 418 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 SPNS1Q9H2V7 528 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 MALT1Q9UDY8 824 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 MBD1Q9UIS9 605 aaPredicted RBP18.72■□□□□ 0.59
SDF4-205ENST00000465727 NCKAP1Q9Y2A7 1128 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 PLOD3O60568 738 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 TNNI3P19429 210 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 GAS1P54826 345 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 PTSQ03393 145 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 C2orf80Q0P641 193 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 COL28A1Q2UY09 1125 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 FAM205BPQ63HN1 556 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 ZNF680Q8NEM1 530 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 ZNF431Q8TF32 576 aaPredicted RBP18.72■□□□□ 0.59
SDF4-205ENST00000465727 ACOT12Q8WYK0 555 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 UCN3Q969E3 161 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 ARHGAP9Q9BRR9 750 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 NLNQ9BYT8 704 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 EMC7Q9NPA0 242 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 TRPM5Q9NZQ8 1165 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 POLHQ9Y253 713 aa18.72■□□□□ 0.59
SDF4-205ENST00000465727 SMIM30A4D0T7 59 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 PRODHO43272 600 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 CHP2O43745 196 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 OR7A10O76100 309 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 TPOP07202 933 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 SEMG2Q02383 582 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 OR2G6Q5TZ20 316 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 ZNF57Q68EA5 555 aaPredicted RBP18.71■□□□□ 0.59
SDF4-205ENST00000465727 IKBIPQ70UQ0 350 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 RTN4RL1Q86UN2 441 aaPredicted RBP18.71■□□□□ 0.59
SDF4-205ENST00000465727 GPR32P1Q8NGA4 272 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 C16orf78Q8WTQ4 265 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 OTULINQ96BN8 352 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 ZNF354BQ96LW1 612 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 MED28Q9H204 178 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 ICKQ9UPZ9 632 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 KCNE2Q9Y6J6 123 aa18.71■□□□□ 0.59
SDF4-205ENST00000465727 NINQ8N4C6 2090 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 TSC22D2O75157 780 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 SEMA7AO75326 666 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 NME6O75414 186 aaPredicted RBP18.7■□□□□ 0.58
SDF4-205ENST00000465727 HLA-DPB1P04440 258 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 CHRM5P08912 532 aaPredicted RBP18.7■□□□□ 0.58
SDF4-205ENST00000465727 GIPRP48546 466 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 CDK5Q00535 292 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 MADCAM1Q13477 382 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 MFSD14CQ5VZR4 134 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 SERPINA13PQ6UXR4 307 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 GATAD2BQ8WXI9 593 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 WBP2Q969T9 261 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 UBL7Q96S82 380 aaPredicted RBP18.7■□□□□ 0.58
SDF4-205ENST00000465727 BET1O15155 118 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 DHFRP00374 187 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 CATP04040 527 aaKnown RBP18.7■□□□□ 0.58
SDF4-205ENST00000465727 MAPK9P45984 424 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 TUFMP49411 452 aaKnown RBP18.7■□□□□ 0.58
SDF4-205ENST00000465727 SMSP52788 366 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 CAV3P56539 151 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 HTRA3P83110 453 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 MC1RQ01726 317 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 GINS1Q14691 196 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 SLC36A4Q6YBV0 504 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 SLCO4C1Q6ZQN7 724 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 OTOP2Q7RTS6 562 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 PRICKLE2Q7Z3G6 844 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 ABI3BPQ7Z7G0 1075 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 IQCF1Q8N6M8 205 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 SLC7A13Q8TCU3 470 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 SLC38A5Q8WUX1 472 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 PTPN18Q99952 460 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 RNF215Q9Y6U7 377 aa18.7■□□□□ 0.58
SDF4-205ENST00000465727 A0A1W2PRQ8 180 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 C7orf66A4D0T2 115 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 RAF1P04049 648 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 ELAVL2Q12926 359 aaKnown RBP18.69■□□□□ 0.58
SDF4-205ENST00000465727 MINDY4Q4G0A6 757 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 KLHL12Q53G59 568 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 TYW3Q6IPR3 259 aaKnown RBP18.69■□□□□ 0.58
SDF4-205ENST00000465727 KIF18BQ86Y91 864 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 OR8H3Q8N146 312 aa18.69■□□□□ 0.58
SDF4-205ENST00000465727 CELF5Q8N6W0 485 aaKnown RBP18.69■□□□□ 0.58
SDF4-205ENST00000465727 ARIH2OSQ8N7S6 290 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms