RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SLAMF7Q9NQ25 335 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 SLC35C2Q9NQQ7 365 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 ANKRD10Q9NXR5 420 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 EHD3Q9NZN3 535 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 ABI3Q9P2A4 366 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 COPS7AQ9UBW8 275 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 MARCOQ9UEW3 520 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-202ENST00000465601 B3GNT3Q9Y2A9 372 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 ESPL1Q14674 2120 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 TMEM200CA6NKL6 621 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 WWP2O00308 870 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 KLF11O14901 512 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 IGKV3-11P04433 115 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 SSTR4P31391 388 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 CD96P40200 585 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 TNFSF10P50591 281 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 RNF4P78317 190 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 MGAT2Q10469 447 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 LTB4RQ15722 352 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF468Q5VIY5 522 aaPredicted RBP11.5□□□□□ -0.57
CHPF2-202ENST00000465601 IL23RQ5VWK5 629 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 RNF111Q6ZNA4 994 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 IKBIPQ70UQ0 350 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 GALNT12Q8IXK2 581 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 KIRREL3Q8IZU9 778 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 LGI4Q8N135 537 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 LRRC25Q8N386 305 aaPredicted RBP11.5□□□□□ -0.57
CHPF2-202ENST00000465601 LIX1Q8N485 282 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 Q8NA96 180 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 FNDC5Q8NAU1 212 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 LRRC8CQ8TDW0 803 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 DYDC1Q8WWB3 177 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 ART5Q96L15 291 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 BBS4Q96RK4 519 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 UTP23Q9BRU9 249 aaKnown RBP11.5□□□□□ -0.57
CHPF2-202ENST00000465601 BRINP2Q9C0B6 783 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 RNF32Q9H0A6 362 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 AKTIPQ9H8T0 292 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 MIEF1Q9NQG6 463 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 GIMAP4Q9NUV9 329 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 INTS9Q9NV88 658 aaKnown RBP11.5□□□□□ -0.57
CHPF2-202ENST00000465601 ENTPD4Q9Y227 616 aa11.5□□□□□ -0.57
CHPF2-202ENST00000465601 OR5H15A6NDH6 313 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 TTLL8A6PVC2 850 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 FCHO1O14526 889 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 SLC28A2O43868 658 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 ITGA10O75578 1167 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 CLPSP04118 112 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 ATP1B1P05026 303 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 S1PR1P21453 382 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 MAPK1P28482 360 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 CASRP41180 1078 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 MLLT10P55197 1068 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 SLC37A1P57057 533 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 OC90Q02509 493 aaPredicted RBP11.49□□□□□ -0.57
CHPF2-202ENST00000465601 FUT7Q11130 342 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 MAP4K2Q12851 820 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 TUBA3CQ13748 450 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF169Q14929 603 aaPredicted RBP11.49□□□□□ -0.57
CHPF2-202ENST00000465601 TLR1Q15399 786 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 PRICKLE4Q2TBC4 344 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 C6orf163Q5TEZ5 329 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 ANKRD26P1Q6NSI1 321 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 TUBA3EQ6PEY2 450 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF605Q86T29 641 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 WDR75Q8IWA0 830 aaKnown RBP11.49□□□□□ -0.57
CHPF2-202ENST00000465601 C9orf40Q8IXQ3 194 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 SAMD14Q8IZD0 417 aaPredicted RBP11.49□□□□□ -0.57
CHPF2-202ENST00000465601 ARMC10Q8N2F6 343 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 OR5L2Q8NGL0 311 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 OR8K3Q8NH51 312 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 KAT2AQ92830 837 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 EPN3Q9H201 632 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 REEP4Q9H6H4 257 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 TAS2R7Q9NYW3 318 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 MAT2BQ9NZL9 334 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 MYOTQ9UBF9 498 aa11.49□□□□□ -0.57
CHPF2-202ENST00000465601 EIF3LQ9Y262 564 aaKnown RBP11.49□□□□□ -0.57
CHPF2-202ENST00000465601 YARS2Q9Y2Z4 477 aaKnown RBP11.49□□□□□ -0.57
CHPF2-202ENST00000465601 DNAJC13O75165 2243 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 TRAV17A0A0B4J275 112 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 MYO1GB0I1T2 1018 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SDHDO14521 159 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 HDAC3O15379 428 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 OR2J2O76002 312 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SORBS2O94875 1100 aaKnown RBP11.48□□□□□ -0.57
CHPF2-202ENST00000465601 PRPS2P11908 318 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 PCSK2P16519 638 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 MPIP34949 423 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SOX18P35713 384 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 ASMTP46597 345 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 MRPS35P82673 323 aaKnown RBP11.48□□□□□ -0.57
CHPF2-202ENST00000465601 EMX2Q04743 252 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 PTGR1Q14914 329 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 EXOSC7Q15024 291 aaKnown RBP11.48□□□□□ -0.57
CHPF2-202ENST00000465601 OR1C1Q15619 314 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 CEBPEQ15744 281 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 TRMT12Q53H54 448 aaKnown RBP11.48□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF385BQ569K4 471 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SPINK14Q6IE38 97 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms