RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CPMP14384 443 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 SOX18P35713 384 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 KRT6CP48668 564 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 FOXA1P55317 472 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 PPIAP62937 165 aaKnown RBP20.09■□□□□ 0.81
LIME1-203ENST00000465591 RAE1P78406 368 aaKnown RBP20.09■□□□□ 0.81
LIME1-203ENST00000465591 FUT7Q11130 342 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 FOXO1Q12778 655 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 LCP2Q13094 533 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 FAM180BQ6P0A1 224 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 SLC48A1Q6P1K1 146 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 ZYG11AQ6WRX3 759 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 TMEM64Q6YI46 380 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 BNC2Q6ZN30 1099 aaPredicted RBP20.09■□□□□ 0.81
LIME1-203ENST00000465591 SLC29A4Q7RTT9 530 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 TDRPQ86YL5 185 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 GALNT12Q8IXK2 581 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 SLC22A8Q8TCC7 542 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 SPACA9Q96E40 222 aaPredicted RBP20.09■□□□□ 0.81
LIME1-203ENST00000465591 SACM1LQ9NTJ5 587 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.09■□□□□ 0.81
LIME1-203ENST00000465591 TUBA8Q9NY65 449 aaPredicted RBP20.09■□□□□ 0.81
LIME1-203ENST00000465591 VPS29Q9UBQ0 182 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 PRSS44E7EML9 344 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 ESRRAP11474 423 aaPredicted RBP20.08■□□□□ 0.81
LIME1-203ENST00000465591 HSD3B1P14060 373 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 S1PR1P21453 382 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 HSD3B2P26439 372 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 HMOX2P30519 316 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 PTGS2P35354 604 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 PIGAP37287 484 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 HMGCS1Q01581 520 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 PLGLB1Q02325 96 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 MGAT2Q10469 447 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 CSTF3Q12996 717 aaKnown RBP20.08■□□□□ 0.81
LIME1-203ENST00000465591 MTFR2Q6P444 385 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 SCIMPQ6UWF3 145 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 FAM47EQ6ZV65 393 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 ZNF808Q8N4W9 903 aaPredicted RBP20.08■□□□□ 0.81
LIME1-203ENST00000465591 CCNYL1Q8N7R7 359 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 ZNF615Q8N8J6 731 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 APIPQ96GX9 242 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 FAM173AQ9BQD7 235 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 ZDHHC11Q9H8X9 412 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 PROK2Q9HC23 129 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 HEY2Q9UBP5 337 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 LIPGQ9Y5X9 500 aa20.08■□□□□ 0.81
LIME1-203ENST00000465591 C1orf226A1L170 272 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 OR6C76A6NM76 312 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 PLIN3O60664 434 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 ULK1O75385 1050 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 SLU7O95391 586 aaKnown RBP20.07■□□□□ 0.8
LIME1-203ENST00000465591 FBXO45P0C2W1 286 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 MYL2P10916 166 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 PORP16435 677 aaPredicted RBP20.07■□□□□ 0.8
LIME1-203ENST00000465591 KRT15P19012 456 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 NT5EP21589 574 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 FEN1P39748 380 aaKnown RBP20.07■□□□□ 0.8
LIME1-203ENST00000465591 PKNOX1P55347 436 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 DUSP8Q13202 625 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 ART3Q13508 389 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 PRAMEF20Q5VT98 475 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 FAM111BQ6SJ93 734 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 RPTNQ6XPR3 784 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 GK5Q6ZS86 529 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 CD163Q86VB7 1156 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 SLC15A4Q8N697 577 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 TMEM251Q8N6I4 163 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 SIMC1Q8NDZ2 872 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 OR10G3Q8NGC4 313 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 OR2W6PQ8NHA6 318 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 FAM57AQ8TBR7 257 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 PAQR8Q8TEZ7 354 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 DMRTA2Q96SC8 542 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 TNFRSF12AQ9NP84 129 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 DTX4Q9Y2E6 619 aa20.07■□□□□ 0.8
LIME1-203ENST00000465591 CHCHD2Q9Y6H1 151 aaPredicted RBP20.07■□□□□ 0.8
LIME1-203ENST00000465591 PRRG2O14669 202 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 ERAL1O75616 437 aaKnown RBP20.06■□□□□ 0.8
LIME1-203ENST00000465591 LRATO95237 230 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 ESRRBO95718 433 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 P04436 131 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 TPOP07202 933 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 CELA3AP09093 270 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 MAGEA5P43359 124 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 PRICKLE4Q2TBC4 344 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 SP5Q6BEB4 398 aaPredicted RBP20.06■□□□□ 0.8
LIME1-203ENST00000465591 ADIPOR1Q96A54 375 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 CNRIP1Q96F85 164 aaPredicted RBP20.06■□□□□ 0.8
LIME1-203ENST00000465591 ZNF681Q96N22 645 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 OR10A5Q9H207 317 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 IL1RL2Q9HB29 575 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 MID1IP1Q9NPA3 183 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 NMRK1Q9NWW6 199 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 MAT2BQ9NZL9 334 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 MCM8Q9UJA3 840 aa20.06■□□□□ 0.8
LIME1-203ENST00000465591 PHF3Q92576 2039 aaKnown RBP20.05■□□□□ 0.8
LIME1-203ENST00000465591 C2orf92A0A1B0GVN3 265 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 GUCY1B2O75343 617 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 ENO1P06733 434 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms