RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 HSDL2Q6YN16 418 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 GALNT12Q8IXK2 581 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 LIX1Q8N485 282 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 CISD2Q8N5K1 135 aaKnown RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 OR9A2Q8NGT5 310 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 FAM76AQ8TAV0 307 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 KAT2AQ92830 837 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 PPP3R2Q96LZ3 170 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 CXorf21Q9HAI6 301 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 SLC35C2Q9NQQ7 365 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 THAP1Q9NVV9 213 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 MAP10Q9P2G4 905 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 TEKT2Q9UIF3 430 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 PSME2Q9UL46 239 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.83□□□□□ -0.68
CUX1-207ENST00000465461 ZNF780BQ9Y6R6 833 aa10.83□□□□□ -0.68
CUX1-207ENST00000465461 CROCCQ5TZA2 2017 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 SYNDIG1LA6NDD5 238 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 OR5H15A6NDH6 313 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 PCSK2P16519 638 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 EFNA1P20827 205 aaPredicted RBP10.82□□□□□ -0.68
CUX1-207ENST00000465461 S1PR1P21453 382 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 TNFSF10P50591 281 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 SLC37A1P57057 533 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 OCRLQ01968 901 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 DUSP8Q13202 625 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 BIKQ13323 160 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 ZNF169Q14929 603 aaPredicted RBP10.82□□□□□ -0.68
CUX1-207ENST00000465461 TLR1Q15399 786 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 OR1C1Q15619 314 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 SPRED3Q2MJR0 410 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 ZNF385BQ569K4 471 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 ATG16L1Q676U5 607 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 HPS6Q86YV9 775 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 LRRC25Q8N386 305 aaPredicted RBP10.82□□□□□ -0.68
CUX1-207ENST00000465461 FNDC5Q8NAU1 212 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 SUN3Q8TAQ9 357 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 CIDECQ96AQ7 238 aaPredicted RBP10.82□□□□□ -0.68
CUX1-207ENST00000465461 FBXL20Q96IG2 436 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 GAL3ST4Q96RP7 486 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 UTP23Q9BRU9 249 aaKnown RBP10.82□□□□□ -0.68
CUX1-207ENST00000465461 PELOQ9BRX2 385 aaKnown RBP10.82□□□□□ -0.68
CUX1-207ENST00000465461 AKTIPQ9H8T0 292 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 MIEF1Q9NQG6 463 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 KLHL1Q9NR64 748 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 MAT2BQ9NZL9 334 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 MYOTQ9UBF9 498 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 COPS7AQ9UBW8 275 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 BCAP29Q9UHQ4 241 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 HAO1Q9UJM8 370 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 DTX4Q9Y2E6 619 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 NTNG1Q9Y2I2 539 aa10.82□□□□□ -0.68
CUX1-207ENST00000465461 COL6A6A6NMZ7 2263 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 GOLGA8QA0A0J9YX86 632 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 GOLGA8OA6NCC3 632 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 GOLGA8NF8WBI6 632 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 DYRK3O43781 588 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 ATP1B1P05026 303 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 PLA2G2AP14555 144 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 GALNSP34059 522 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 NCBP2P52298 156 aaKnown RBP eCLIP10.81□□□□□ -0.68
CUX1-207ENST00000465461 FUT7Q11130 342 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 PTGR1Q14914 329 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 INPP5JQ15735 1006 aaPredicted RBP10.81□□□□□ -0.68
CUX1-207ENST00000465461 MPEG1Q2M385 716 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 ZNF628Q5EBL2 1059 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 TMEM64Q6YI46 380 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 RNF111Q6ZNA4 994 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 ZNF227Q86WZ6 799 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 WDR75Q8IWA0 830 aaKnown RBP10.81□□□□□ -0.68
CUX1-207ENST00000465461 TRIM42Q8IWZ5 723 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 KRTCAP2Q8N6L1 136 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 ZNF615Q8N8J6 731 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 OR52R1Q8NGF1 315 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 SNRNP40Q96DI7 357 aaKnown RBP10.81□□□□□ -0.68
CUX1-207ENST00000465461 METTL2AQ96IZ6 378 aaKnown RBP10.81□□□□□ -0.68
CUX1-207ENST00000465461 MAGED4Q96JG8 741 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 BBS4Q96RK4 519 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 RASL10BQ96S79 203 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 CCT7Q99832 543 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 OR10A5Q9H207 317 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 WDR55Q9H6Y2 383 aaPredicted RBP10.81□□□□□ -0.68
CUX1-207ENST00000465461 SLCO1B3Q9NPD5 702 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 INTS9Q9NV88 658 aaKnown RBP10.81□□□□□ -0.68
CUX1-207ENST00000465461 SH3BP4Q9P0V3 963 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 LRFN1Q9P244 771 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 ABI3Q9P2A4 366 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 ENTPD4Q9Y227 616 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 TMED5Q9Y3A6 229 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 PCDHGA10Q9Y5H3 936 aa10.81□□□□□ -0.68
CUX1-207ENST00000465461 BOD1L1Q8NFC6 3051 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 MYO1GB0I1T2 1018 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 SDHDO14521 159 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 FCHO1O14526 889 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 NEURL1O76050 574 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 OR6B1O95007 311 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 CBX7O95931 251 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 G6PDP11413 515 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 SOX3P41225 446 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 GSTM5P46439 218 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms