RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 MSRB3Q8IXL7 192 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 DEFB107AQ8IZN7 70 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 CLEC4FQ8N1N0 589 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 TRIML2Q8N7C3 387 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 ENDOVQ8N8Q3 282 aaKnown RBP12.54□□□□□ -0.4
ATF3-208ENST00000465155 OR5AK3PQ8NH89 298 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 DOK4Q8TEW6 326 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 KAT2AQ92830 837 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 AURKBQ96GD4 344 aaPredicted RBP12.54□□□□□ -0.4
ATF3-208ENST00000465155 MAGED4Q96JG8 741 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 CGREF1Q99674 301 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 BTBD10Q9BSF8 475 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 TRIM8Q9BZR9 551 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 TRIM4Q9C037 500 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 SEMA3GQ9NS98 782 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 SIRT3Q9NTG7 399 aaPredicted RBP12.54□□□□□ -0.4
ATF3-208ENST00000465155 NDE1Q9NXR1 346 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 C3orf18Q9UK00 162 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 PTRH2Q9Y3E5 179 aaKnown RBP12.54□□□□□ -0.4
ATF3-208ENST00000465155 NEUROG3Q9Y4Z2 214 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 TRBV5-3A0A0A0MS03 114 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 TCRBV16S1A1N1A0A5B0 115 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 ALOX12BO75342 701 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 KLF7O75840 302 aaPredicted RBP12.53□□□□□ -0.4
ATF3-208ENST00000465155 DXOO77932 396 aaKnown RBP12.53□□□□□ -0.4
ATF3-208ENST00000465155 CD63P08962 238 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 ZCCHC18P0CG32 403 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 SPINK2P20155 84 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 MC3RP41968 323 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 STAT5AP42229 794 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 PSME3P61289 254 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 MRPS35P82673 323 aaKnown RBP12.53□□□□□ -0.4
ATF3-208ENST00000465155 RTP5Q14D33 572 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 PRICKLE4Q2TBC4 344 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 SPDYE7PQ495Y7 208 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 C8orf82Q6P1X6 216 aaPredicted RBP12.53□□□□□ -0.4
ATF3-208ENST00000465155 DGAT2L6Q6ZPD8 337 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 LANCL3Q6ZV70 420 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 SZRD1Q7Z422 152 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 PGAM4Q8N0Y7 254 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 C7orf57Q8NEG2 295 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 PSMA8Q8TAA3 256 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 METTL21AQ8WXB1 218 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 RIT1Q92963 219 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 ELP4Q96EB1 424 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 ANKRD27Q96NW4 1050 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 HOPXQ9BPY8 73 aaPredicted RBP12.53□□□□□ -0.4
ATF3-208ENST00000465155 GPATCH1Q9BRR8 931 aaKnown RBP12.53□□□□□ -0.4
ATF3-208ENST00000465155 PELOQ9BRX2 385 aaKnown RBP12.53□□□□□ -0.4
ATF3-208ENST00000465155 SLC35A5Q9BS91 424 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 ANKRA2Q9H9E1 313 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 PNO1Q9NRX1 252 aaKnown RBP12.53□□□□□ -0.4
ATF3-208ENST00000465155 THSD1Q9NS62 852 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 ACSL6Q9UKU0 697 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 PADI2Q9Y2J8 665 aa12.53□□□□□ -0.4
ATF3-208ENST00000465155 RNF103-CHMP3A0A140T963 221 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 TRABD2BA6NFA1 517 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 A8MUA0 341 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 C1QCP02747 245 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 RAB40ALP0C0E4 278 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 CT62P0C5K7 136 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 TNNI3P19429 210 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 UQCRC2P22695 453 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 CHI3L1P36222 383 aaPredicted RBP12.52□□□□□ -0.4
ATF3-208ENST00000465155 FOLR3P41439 243 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 RPS15P62841 145 aaKnown RBP12.52□□□□□ -0.4
ATF3-208ENST00000465155 RUNDC3AQ59EK9 446 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 ZNF628Q5EBL2 1059 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 C6orf163Q5TEZ5 329 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 NANOGP8Q6NSW7 305 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 FAM111BQ6SJ93 734 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 GALNT12Q8IXK2 581 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 OR2Y1Q8NGV0 311 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 ZNF675Q8TD23 568 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 NKD1Q969G9 470 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 NXPE2Q96DL1 559 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 FAM120BQ96EK7 910 aaKnown RBP12.52□□□□□ -0.4
ATF3-208ENST00000465155 SCNM1Q9BWG6 230 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 NANOGQ9H9S0 305 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 CXorf21Q9HAI6 301 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 MAT2BQ9NZL9 334 aa12.52□□□□□ -0.4
ATF3-208ENST00000465155 FARSAQ9Y285 508 aaKnown RBP12.52□□□□□ -0.4
ATF3-208ENST00000465155 SYNDIG1LA6NDD5 238 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.51□□□□□ -0.41
ATF3-208ENST00000465155 CLIC1O00299 241 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 SLITRK5O94991 958 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 UMODP07911 640 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 SLC6A2P23975 617 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 GALNSP34059 522 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 SOX18P35713 384 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 DLSTP36957 453 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 CCT3P49368 545 aaKnown RBP12.51□□□□□ -0.41
ATF3-208ENST00000465155 PGDP52209 483 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 PRKAG1P54619 331 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 OR4D2P58180 307 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 MTPNP58546 118 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 RPS18P62269 152 aaKnown RBP12.51□□□□□ -0.41
ATF3-208ENST00000465155 DNASE1L3Q13609 305 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 DNAL1Q4LDG9 190 aa12.51□□□□□ -0.41
ATF3-208ENST00000465155 TRMT12Q53H54 448 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms