RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 SLC35E2P0CK97 266 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 LAMP1P11279 417 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 COX7A2P14406 83 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 DRD2P14416 443 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 PCSK2P16519 638 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 MDH1P40925 334 aaKnown RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 IDH3AP50213 366 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 SRSF11Q05519 484 aaKnown RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 TCTN3Q6NUS6 607 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 EPGNQ6UW88 154 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 WDR53Q7Z5U6 358 aaPredicted RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 C9orf40Q8IXQ3 194 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 LRRC34Q8IZ02 419 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 OR9I1Q8NGQ6 314 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 ELP5Q8TE02 316 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 PPCDCQ96CD2 204 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 BBS4Q96RK4 519 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 GAL3ST4Q96RP7 486 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 GLIPR2Q9H4G4 154 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 REEP4Q9H6H4 257 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 EIF3LQ9Y262 564 aaKnown RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 CPAMD8Q8IZJ3 1885 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 NUP214P35658 2090 aaPredicted RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 BLACEA4D250 179 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 WWP2O00308 870 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 SCAMP2O15127 329 aaKnown RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 ZNF354AO60765 605 aaPredicted RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 CEACAM4O75871 244 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 CYC1P08574 325 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 UFM1P61960 85 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 DUSP8Q13202 625 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 EXT1Q16394 746 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 PRICKLE4Q2TBC4 344 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 PGS1Q32NB8 556 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 ZNF468Q5VIY5 522 aaPredicted RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 AGAP7PQ5VUJ5 663 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 TMEM107Q6UX40 140 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 RGS9BPQ6ZS82 235 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 BEST3Q8N1M1 668 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 OR14A16Q8NHC5 309 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 C9orf43Q8TAL5 461 aaPredicted RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 DAZLQ92904 295 aaKnown RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 VPS50Q96JG6 964 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 MAELQ96JY0 434 aaKnown RBP11.05□□□□□ -0.64
APTX-213ENST00000465003 AGAP4Q96P64 663 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 FAM107BQ9H098 131 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 CDCP1Q9H5V8 836 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 MMP25Q9NPA2 562 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 MAT2BQ9NZL9 334 aa11.05□□□□□ -0.64
APTX-213ENST00000465003 TLN1Q9Y490 2541 aaKnown RBP11.04□□□□□ -0.64
APTX-213ENST00000465003 PRRC2CQ9Y520 2896 aaKnown RBP11.04□□□□□ -0.64
APTX-213ENST00000465003 TMEM200CA6NKL6 621 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 CSNK2A2P19784 350 aaPredicted RBP11.04□□□□□ -0.64
APTX-213ENST00000465003 MAPK1P28482 360 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 IL12AP29459 219 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 MC3RP41968 323 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 CLCN2P51788 898 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 SEC24CP53992 1094 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 MGAT2Q10469 447 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 NFATC3Q12968 1075 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 NADK2Q4G0N4 442 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 IRAK1BP1Q5VVH5 260 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 TMEM64Q6YI46 380 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 ASB18Q6ZVZ8 466 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 IKBIPQ70UQ0 350 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 SZRD1Q7Z422 152 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 ANKRD46Q86W74 232 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 VWA5B2Q8N398 1253 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 CATSPER1Q8NEC5 780 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 OR7G2Q8NG99 324 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 OR1N1Q8NGS0 311 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 M1APQ8TC57 530 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 VMP1Q96GC9 406 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 METTL2AQ96IZ6 378 aaKnown RBP11.04□□□□□ -0.64
APTX-213ENST00000465003 DEFB126Q9BYW3 111 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 TCF7L2Q9NQB0 619 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 AIG1Q9NVV5 245 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 PSME2Q9UL46 239 aa11.04□□□□□ -0.64
APTX-213ENST00000465003 SLCO1B7G3V0H7 640 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 PCDH17O14917 1159 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 ANKRD28O15084 1053 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 PDPK1O15530 556 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 IGKV3-11P04433 115 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 ATP1B1P05026 303 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 ABCB1P08183 1280 aaPredicted RBP11.03□□□□□ -0.64
APTX-213ENST00000465003 CDK9P50750 372 aaKnown RBP11.03□□□□□ -0.64
APTX-213ENST00000465003 DGKQP52824 942 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 PDE7AQ13946 482 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 OR4F3Q6IEY1 312 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 HSDL2Q6YN16 418 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 RIMKLAQ8IXN7 391 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 CLECL1Q8IZS7 167 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 CLEC4FQ8N1N0 589 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 OR52R1Q8NGF1 315 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 OTUB1Q96FW1 271 aaPredicted RBP11.03□□□□□ -0.64
APTX-213ENST00000465003 FBXL20Q96IG2 436 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 AMDHD1Q96NU7 426 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 TACO1Q9BSH4 297 aaKnown RBP11.03□□□□□ -0.64
APTX-213ENST00000465003 GIMAP4Q9NUV9 329 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 EHD3Q9NZN3 535 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms